Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LINC00854A0A1B0GVQ3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00854A0A1B0GVQ3 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00854A0A1B0GVQ3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.12■□□□□ 0.97
LINC00854A0A1B0GVQ3 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.12■□□□□ 0.97
LINC00854A0A1B0GVQ3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00854A0A1B0GVQ3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LINC00854A0A1B0GVQ3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00854A0A1B0GVQ3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.11■□□□□ 0.97
LINC00854A0A1B0GVQ3 AL133380.1-201ENST00000506013 324 ntBASIC21.11■□□□□ 0.97
LINC00854A0A1B0GVQ3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.11■□□□□ 0.97
LINC00854A0A1B0GVQ3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
LINC00854A0A1B0GVQ3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.11■□□□□ 0.97
LINC00854A0A1B0GVQ3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LINC00854A0A1B0GVQ3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.09■□□□□ 0.97
LINC00854A0A1B0GVQ3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00854A0A1B0GVQ3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00854A0A1B0GVQ3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LINC00854A0A1B0GVQ3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LINC00854A0A1B0GVQ3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.08■□□□□ 0.96
LINC00854A0A1B0GVQ3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.07■□□□□ 0.96
LINC00854A0A1B0GVQ3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.07■□□□□ 0.96
LINC00854A0A1B0GVQ3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LINC00854A0A1B0GVQ3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LINC00854A0A1B0GVQ3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 LINC00543-201ENST00000567234 1845 ntBASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
LINC00854A0A1B0GVQ3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LINC00854A0A1B0GVQ3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 ZNRF2P1-201ENST00000441407 443 ntBASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LINC00854A0A1B0GVQ3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 AC010501.1-201ENST00000606270 1962 ntBASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LINC00854A0A1B0GVQ3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00854A0A1B0GVQ3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00854A0A1B0GVQ3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00854A0A1B0GVQ3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00854A0A1B0GVQ3 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00854A0A1B0GVQ3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LINC00854A0A1B0GVQ3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LINC00854A0A1B0GVQ3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LINC00854A0A1B0GVQ3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms