Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00959A0A1B0GUT2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LINC00959A0A1B0GUT2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LINC00959A0A1B0GUT2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LINC00959A0A1B0GUT2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 AC142381.3-201ENST00000568208 1670 ntBASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LINC00959A0A1B0GUT2 AC096887.2-201ENST00000623443 1957 ntBASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LINC00959A0A1B0GUT2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 AC093323.1-202ENST00000635031 2045 ntBASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.39■□□□□ 0.21
LINC00959A0A1B0GUT2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 AC126177.7-201ENST00000547904 679 ntBASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
LINC00959A0A1B0GUT2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00959A0A1B0GUT2 AC022211.4-201ENST00000625094 2161 ntBASIC16.37■□□□□ 0.21
LINC00959A0A1B0GUT2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LINC00959A0A1B0GUT2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC00959A0A1B0GUT2 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 CR559946.2-201ENST00000623684 991 ntBASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC00959A0A1B0GUT2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC00959A0A1B0GUT2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms