Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Gm11175-201ENSMUST00000116172 543 ntBASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv17A0A140T8P8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv17A0A140T8P8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv17A0A140T8P8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv17A0A140T8P8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv17A0A140T8P8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv17A0A140T8P8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv17A0A140T8P8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trbv17A0A140T8P8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Gm44428-201ENSMUST00000204474 874 ntBASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trbv17A0A140T8P8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Trbv17A0A140T8P8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv17A0A140T8P8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.63■□□□□ 0.25
Trbv17A0A140T8P8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv17A0A140T8P8 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trbv17A0A140T8P8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trbv17A0A140T8P8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv17A0A140T8P8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trbv17A0A140T8P8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv17A0A140T8P8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv17A0A140T8P8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv17A0A140T8P8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trbv17A0A140T8P8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv17A0A140T8P8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv17A0A140T8P8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv17A0A140T8P8 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv17A0A140T8P8 Gm27502-201ENSMUST00000183495 199 ntBASIC16.6■□□□□ 0.25
Trbv17A0A140T8P8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trbv17A0A140T8P8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trbv17A0A140T8P8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.25
Trbv17A0A140T8P8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv17A0A140T8P8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv17A0A140T8P8 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Trbv17A0A140T8P8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Mir6538-201ENSMUST00000183713 110 ntBASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trbv17A0A140T8P8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms