Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Igkv8-27A0A0G2JF28 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Igkv8-27A0A0G2JF28 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Igkv8-27A0A0G2JF28 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 AC153962.1-201ENSMUST00000218530 1948 ntBASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC13.78□□□□□ -0.2
Igkv8-27A0A0G2JF28 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Igkv8-27A0A0G2JF28 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gm14121-201ENSMUST00000121441 1380 ntBASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Igkv8-27A0A0G2JF28 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Igkv8-27A0A0G2JF28 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Igkv8-27A0A0G2JF28 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv8-27A0A0G2JF28 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv8-27A0A0G2JF28 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC13.74□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gm30023-201ENSMUST00000197970 889 ntBASIC13.74□□□□□ -0.21
Igkv8-27A0A0G2JF28 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv8-27A0A0G2JF28 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gm4419-202ENSMUST00000226239 1431 ntBASIC13.73□□□□□ -0.21
Igkv8-27A0A0G2JF28 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv8-27A0A0G2JF28 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Igkv8-27A0A0G2JF28 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC13.73□□□□□ -0.21
Igkv8-27A0A0G2JF28 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gm9910-201ENSMUST00000195385 1550 ntBASIC13.72□□□□□ -0.21
Igkv8-27A0A0G2JF28 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv8-27A0A0G2JF28 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC13.72□□□□□ -0.21
Igkv8-27A0A0G2JF28 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv8-27A0A0G2JF28 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Igkv8-27A0A0G2JF28 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Igkv8-27A0A0G2JF28 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv8-27A0A0G2JF28 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv8-27A0A0G2JF28 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv8-27A0A0G2JF28 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Igkv8-27A0A0G2JF28 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv8-27A0A0G2JF28 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Igkv8-27A0A0G2JF28 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Igkv8-27A0A0G2JF28 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Igkv8-27A0A0G2JF28 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.69□□□□□ -0.22
Igkv8-27A0A0G2JF28 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Igkv8-27A0A0G2JF28 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms