Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV13-1A0A0B4J241 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 DUX4L29-201ENST00000425409 679 ntBASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 AL162393.1-201ENST00000437852 946 ntBASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 AC021231.2-201ENST00000594613 730 ntBASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 NRG1-221ENST00000614767 762 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV13-1A0A0B4J241 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-1A0A0B4J241 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV13-1A0A0B4J241 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV13-1A0A0B4J241 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-1A0A0B4J241 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV13-1A0A0B4J241 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV13-1A0A0B4J241 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV13-1A0A0B4J241 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV13-1A0A0B4J241 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV13-1A0A0B4J241 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 AC142381.3-201ENST00000568208 1670 ntBASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV13-1A0A0B4J241 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV13-1A0A0B4J241 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV13-1A0A0B4J241 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV13-1A0A0B4J241 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAV13-1A0A0B4J241 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV13-1A0A0B4J241 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV13-1A0A0B4J241 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV13-1A0A0B4J241 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV13-1A0A0B4J241 AC022211.4-201ENST00000625094 2161 ntBASIC16.58■□□□□ 0.25
TRAV13-1A0A0B4J241 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRAV13-1A0A0B4J241 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 MED17-227ENST00000640521 2047 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TRAV13-1A0A0B4J241 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms