Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Trbv3A0A0A6YYE2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv3A0A0A6YYE2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv3A0A0A6YYE2 Gm37136-201ENSMUST00000194368 194 ntBASIC16.94■□□□□ 0.3
Trbv3A0A0A6YYE2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv3A0A0A6YYE2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trbv3A0A0A6YYE2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv3A0A0A6YYE2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv3A0A0A6YYE2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.93■□□□□ 0.3
Trbv3A0A0A6YYE2 Gm22567-201ENSMUST00000175542 342 ntBASIC16.93■□□□□ 0.3
Trbv3A0A0A6YYE2 Gm12504-201ENSMUST00000120860 2231 ntBASIC16.93■□□□□ 0.3
Trbv3A0A0A6YYE2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trbv3A0A0A6YYE2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv3A0A0A6YYE2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv3A0A0A6YYE2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv3A0A0A6YYE2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv3A0A0A6YYE2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trbv3A0A0A6YYE2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trbv3A0A0A6YYE2 Gm9397-201ENSMUST00000200125 605 ntBASIC16.9■□□□□ 0.3
Trbv3A0A0A6YYE2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv3A0A0A6YYE2 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Trbv3A0A0A6YYE2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Trbv3A0A0A6YYE2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv3A0A0A6YYE2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC16.89■□□□□ 0.29
Trbv3A0A0A6YYE2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trbv3A0A0A6YYE2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trbv3A0A0A6YYE2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trbv3A0A0A6YYE2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trbv3A0A0A6YYE2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trbv3A0A0A6YYE2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trbv3A0A0A6YYE2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trbv3A0A0A6YYE2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC16.83■□□□□ 0.28
Trbv3A0A0A6YYE2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trbv3A0A0A6YYE2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Trbv3A0A0A6YYE2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trbv3A0A0A6YYE2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms