Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.27■□□□□ 0.68
Sirpb1bA0A0A6YXN8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1bA0A0A6YXN8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.25■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.24■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1bA0A0A6YXN8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sirpb1bA0A0A6YXN8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Gm14523-201ENSMUST00000117260 558 ntBASIC19.18■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1bA0A0A6YXN8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sirpb1bA0A0A6YXN8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sirpb1bA0A0A6YXN8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sirpb1bA0A0A6YXN8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms