Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav17A0A075B655 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.38■□□□□ 0.37
Trav17A0A075B655 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.38■□□□□ 0.37
Trav17A0A075B655 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav17A0A075B655 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav17A0A075B655 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav17A0A075B655 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.37■□□□□ 0.37
Trav17A0A075B655 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Trav17A0A075B655 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Trav17A0A075B655 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav17A0A075B655 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav17A0A075B655 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav17A0A075B655 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Trav17A0A075B655 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav17A0A075B655 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav17A0A075B655 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav17A0A075B655 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav17A0A075B655 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav17A0A075B655 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.35■□□□□ 0.37
Trav17A0A075B655 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav17A0A075B655 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav17A0A075B655 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav17A0A075B655 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.35■□□□□ 0.37
Trav17A0A075B655 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav17A0A075B655 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav17A0A075B655 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav17A0A075B655 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Trav17A0A075B655 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Trav17A0A075B655 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.33■□□□□ 0.36
Trav17A0A075B655 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav17A0A075B655 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.32■□□□□ 0.36
Trav17A0A075B655 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav17A0A075B655 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav17A0A075B655 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav17A0A075B655 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav17A0A075B655 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav17A0A075B655 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav17A0A075B655 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav17A0A075B655 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trav17A0A075B655 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav17A0A075B655 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav17A0A075B655 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav17A0A075B655 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trav17A0A075B655 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav17A0A075B655 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav17A0A075B655 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav17A0A075B655 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.28■□□□□ 0.36
Trav17A0A075B655 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav17A0A075B655 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.27■□□□□ 0.36
Trav17A0A075B655 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav17A0A075B655 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trav17A0A075B655 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Trav17A0A075B655 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.27■□□□□ 0.35
Trav17A0A075B655 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav17A0A075B655 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav17A0A075B655 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms