Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav3-4A0A075B654 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav3-4A0A075B654 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-4A0A075B654 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-4A0A075B654 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-4A0A075B654 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trav3-4A0A075B654 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-4A0A075B654 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav3-4A0A075B654 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Particl-201ENSMUST00000205370 1560 ntBASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav3-4A0A075B654 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-4A0A075B654 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-4A0A075B654 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-4A0A075B654 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-4A0A075B654 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav3-4A0A075B654 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-4A0A075B654 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-4A0A075B654 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav3-4A0A075B654 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav3-4A0A075B654 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-4A0A075B654 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav3-4A0A075B654 Gm6934-201ENSMUST00000194780 1905 ntBASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav3-4A0A075B654 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav3-4A0A075B654 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-4A0A075B654 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-4A0A075B654 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav3-4A0A075B654 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-4A0A075B654 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-4A0A075B654 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-4A0A075B654 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav3-4A0A075B654 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav3-4A0A075B654 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav3-4A0A075B654 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav3-4A0A075B654 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav3-4A0A075B654 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav3-4A0A075B654 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav3-4A0A075B654 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-4A0A075B654 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav3-4A0A075B654 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-4A0A075B654 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav3-4A0A075B654 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Trav3-4A0A075B654 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-4A0A075B654 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav3-4A0A075B654 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-4A0A075B654 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav3-4A0A075B654 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms