Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 NAMPT-210ENST00000486949 1115 ntTSL 25.25□□□□□ -1.576e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-211ENST00000489358 581 ntTSL 35.19□□□□□ -1.586e-6■□□□□ 8.1
SRSF1Q07955 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.9□□□□□ -1.626e-6■□□□□ 8.1
SRSF1Q07955 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.9□□□□□ -1.636e-6■□□□□ 8.1
SRSF1Q07955 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.78□□□□□ -1.646e-6■□□□□ 8.1
SRSF1Q07955 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.38□□□□□ -1.876e-6■□□□□ 8.1
SRSF1Q07955 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.27□□□□□ -1.896e-6■□□□□ 8.1
SRSF1Q07955 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.896e-6■□□□□ 8.1
SRSF1Q07955 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.694e-15■□□□□ 8.1
SRSF1Q07955 CHFR-218ENST00000540963 875 ntTSL 226.98■■□□□ 1.914e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.424e-6■□□□□ 8.1
SRSF1Q07955 CHFR-206ENST00000499045 505 ntTSL 223.4■■□□□ 1.344e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-219ENST00000542099 1119 ntTSL 323.07■■□□□ 1.284e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.254e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-217ENST00000540382 1677 ntTSL 522.11■■□□□ 1.134e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-209ENST00000442210 716 ntTSL 321.94■■□□□ 1.14e-6■□□□□ 8.1
SRSF1Q07955 CHFR-215ENST00000537551 596 ntTSL 221.5■■□□□ 1.034e-6■□□□□ 8.1
SRSF1Q07955 RNF4-205ENST00000504224 560 ntTSL 421.06■□□□□ 0.964e-6■□□□□ 8.1
SRSF1Q07955 RTKN-205ENST00000464094 1266 ntTSL 1 (best)21.02■□□□□ 0.964e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)20.97■□□□□ 0.954e-6■□□□□ 8.1
SRSF1Q07955 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.944e-6■□□□□ 8.1
SRSF1Q07955 TCIRG1-203ENST00000524870 830 ntTSL 1 (best)20.78■□□□□ 0.929e-8■□□□□ 8.1
SRSF1Q07955 E2F6-205ENST00000437573 1253 ntTSL 1 (best)20.76■□□□□ 0.919e-8■□□□□ 8.1
SRSF1Q07955 E2F6-208ENST00000468775 1061 ntTSL 220.76■□□□□ 0.919e-8■□□□□ 8.1
SRSF1Q07955 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.94e-6■□□□□ 8.1
SRSF1Q07955 RTKN-209ENST00000484453 820 ntTSL 1 (best)20.56■□□□□ 0.884e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.874e-6■□□□□ 8.1
SRSF1Q07955 SMG7-205ENST00000440812 1190 ntTSL 520.38■□□□□ 0.851e-7■□□□□ 8.1
SRSF1Q07955 ARL6IP4-218ENST00000540708 1782 ntTSL 220.21■□□□□ 0.834e-6■□□□□ 8.1
SRSF1Q07955 E2F6-210ENST00000498701 610 ntTSL 420.01■□□□□ 0.799e-8■□□□□ 8.1
SRSF1Q07955 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.97■□□□□ 0.794e-6■□□□□ 8.1
SRSF1Q07955 CHFR-212ENST00000536196 597 ntTSL 419.97■□□□□ 0.794e-6■□□□□ 8.1
SRSF1Q07955 CHFR-217ENST00000540537 913 ntTSL 319.95■□□□□ 0.784e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.764e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-214ENST00000536502 1273 ntTSL 219.63■□□□□ 0.734e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-225ENST00000471533 329 ntTSL 319.07■□□□□ 0.644e-6■□□□□ 8.1
SRSF1Q07955 GCN1-207ENST00000550471 918 ntTSL 318.92■□□□□ 0.624e-6■□□□□ 8.1
SRSF1Q07955 TCIRG1-214ENST00000533005 1655 ntTSL 518.72■□□□□ 0.599e-8■□□□□ 8.1
SRSF1Q07955 COPE-204ENST00000593827 601 ntTSL 318.66■□□□□ 0.584e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-213ENST00000536073 562 ntTSL 218.64■□□□□ 0.574e-6■□□□□ 8.1
SRSF1Q07955 E2F6-203ENST00000421117 907 ntTSL 518.57■□□□□ 0.569e-8■□□□□ 8.1
SRSF1Q07955 CHFR-209ENST00000535181 753 ntTSL 218.56■□□□□ 0.564e-6■□□□□ 8.1
SRSF1Q07955 SMG7-206ENST00000444547 580 ntTSL 418.54■□□□□ 0.561e-7■□□□□ 8.1
SRSF1Q07955 SMG7-203ENST00000367538 328 ntTSL 218.53■□□□□ 0.561e-7■□□□□ 8.1
SRSF1Q07955 SPATS2L-216ENST00000444012 605 ntTSL 418.51■□□□□ 0.554e-6■□□□□ 8.1
SRSF1Q07955 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.46■□□□□ 0.554e-6■□□□□ 8.1
SRSF1Q07955 GCN1-203ENST00000547369 595 ntTSL 318.16■□□□□ 0.54e-6■□□□□ 8.1
SRSF1Q07955 COPE-208ENST00000598969 1770 ntTSL 518.03■□□□□ 0.484e-6■□□□□ 8.1
SRSF1Q07955 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.97■□□□□ 0.474e-6■□□□□ 8.1
SRSF1Q07955 HDAC10-215ENST00000488270 715 ntTSL 317.74■□□□□ 0.434e-6■□□□□ 8.1
SRSF1Q07955 HDAC10-218ENST00000496909 732 ntTSL 317.74■□□□□ 0.434e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-221ENST00000459656 1901 ntTSL 1 (best)17.68■□□□□ 0.424e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.414e-6■□□□□ 8.1
SRSF1Q07955 RNF4-204ENST00000503659 558 ntTSL 417.38■□□□□ 0.374e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-212ENST00000428692 541 ntTSL 417.28■□□□□ 0.364e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-220ENST00000457757 835 ntTSL 517.28■□□□□ 0.364e-6■□□□□ 8.1
SRSF1Q07955 SMG7-213ENST00000507691 760 ntTSL 517.22■□□□□ 0.351e-7■□□□□ 8.1
SRSF1Q07955 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.344e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-211ENST00000423749 771 ntTSL 516.7■□□□□ 0.264e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-203ENST00000392433 1370 ntTSL 216.43■□□□□ 0.224e-6■□□□□ 8.1
SRSF1Q07955 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.29■□□□□ 0.24e-6■□□□□ 8.1
SRSF1Q07955 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.28■□□□□ 0.24e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-212ENST00000456762 796 ntAPPRIS ALT2 TSL 216.19■□□□□ 0.184e-6■□□□□ 8.1
SRSF1Q07955 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.15■□□□□ 0.184e-6■□□□□ 8.1
SRSF1Q07955 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.154e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-215ENST00000539576 1684 ntTSL 515.76■□□□□ 0.114e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.074e-6■□□□□ 8.1
SRSF1Q07955 CHFR-214ENST00000536932 584 ntTSL 415.39■□□□□ 0.054e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.024e-6■□□□□ 8.1
SRSF1Q07955 RNF4-209ENST00000507784 582 ntTSL 214.96□□□□□ -0.014e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.184e-6■□□□□ 8.1
SRSF1Q07955 TUBGCP6-205ENST00000473946 1733 ntTSL 213.86□□□□□ -0.199e-8■□□□□ 8.1
SRSF1Q07955 TUBGCP6-208ENST00000498611 5274 ntTSL 1 (best)13.85□□□□□ -0.199e-8■□□□□ 8.1
SRSF1Q07955 SPATS2L-226ENST00000471601 1730 ntTSL 213.82□□□□□ -0.24e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.82□□□□□ -0.24e-6■□□□□ 8.1
SRSF1Q07955 RTKN-207ENST00000472518 1105 ntTSL 1 (best)13.76□□□□□ -0.214e-6■□□□□ 8.1
SRSF1Q07955 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.214e-6■□□□□ 8.1
SRSF1Q07955 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.66□□□□□ -0.229e-8■□□□□ 8.1
SRSF1Q07955 SMG7-204ENST00000419169 2483 ntAPPRIS ALT2 TSL 213.31□□□□□ -0.281e-7■□□□□ 8.1
SRSF1Q07955 RNF4-213ENST00000509388 569 ntTSL 313.1□□□□□ -0.314e-6■□□□□ 8.1
SRSF1Q07955 NOP56-210ENST00000470143 663 ntTSL 213.09□□□□□ -0.319e-8■□□□□ 8.1
SRSF1Q07955 SPATS2L-214ENST00000439084 584 ntTSL 312.91□□□□□ -0.344e-6■□□□□ 8.1
SRSF1Q07955 RNF4-202ENST00000502316 855 ntTSL 212.75□□□□□ -0.374e-6■□□□□ 8.1
SRSF1Q07955 RNF4-215ENST00000511843 586 ntTSL 512.52□□□□□ -0.414e-6■□□□□ 8.1
SRSF1Q07955 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.424e-6■□□□□ 8.1
SRSF1Q07955 RNF4-208ENST00000507247 616 ntTSL 1 (best)12.4□□□□□ -0.424e-6■□□□□ 8.1
SRSF1Q07955 RNF4-206ENST00000504782 614 ntTSL 212.36□□□□□ -0.434e-6■□□□□ 8.1
SRSF1Q07955 ARL6IP4-206ENST00000413381 799 ntAPPRIS ALT2 TSL 512.27□□□□□ -0.454e-6■□□□□ 8.1
SRSF1Q07955 RTKN-204ENST00000460968 842 ntTSL 212.17□□□□□ -0.464e-6■□□□□ 8.1
SRSF1Q07955 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC12.16□□□□□ -0.464e-6■□□□□ 8.1
SRSF1Q07955 E2F6-204ENST00000428221 3139 ntTSL 1 (best)11.97□□□□□ -0.499e-8■□□□□ 8.1
SRSF1Q07955 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.54e-6■□□□□ 8.1
SRSF1Q07955 RNF4-218ENST00000513284 517 ntTSL 411.87□□□□□ -0.514e-6■□□□□ 8.1
SRSF1Q07955 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC11.83□□□□□ -0.524e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.534e-6■□□□□ 8.1
SRSF1Q07955 SPATS2L-219ENST00000453663 637 ntTSL 411.68□□□□□ -0.544e-6■□□□□ 8.1
SRSF1Q07955 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.579e-8■□□□□ 8.1
SRSF1Q07955 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC11.49□□□□□ -0.574e-6■□□□□ 8.1
SRSF1Q07955 IL17RB-203ENST00000494338 1048 ntTSL 511.45□□□□□ -0.581e-7■□□□□ 8.1
SRSF1Q07955 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.589e-8■□□□□ 8.1
Retrieved 100 of 14,836 protein–RNA pairs in 55.4 ms