Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.133e-6■□□□□ 8.3
SRSF1Q07955 VWCE-203ENST00000398808 717 ntTSL 315.55■□□□□ 0.083e-6■□□□□ 8.3
SRSF1Q07955 SRM-204ENST00000475189 545 ntTSL 214.91□□□□□ -0.023e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-202ENST00000355486 574 ntTSL 214.8□□□□□ -0.043e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-215ENST00000543562 444 ntTSL 1 (best)14.73□□□□□ -0.053e-6■□□□□ 8.3
SRSF1Q07955 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.32□□□□□ -0.123e-6■□□□□ 8.3
SRSF1Q07955 SLC12A7-204ENST00000513223 1066 ntTSL 514.09□□□□□ -0.153e-6■□□□□ 8.3
SRSF1Q07955 AL096870.2-202ENST00000528804 2102 ntTSL 214.06□□□□□ -0.163e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC13.92□□□□□ -0.183e-6■□□□□ 8.3
SRSF1Q07955 ZNF556-203ENST00000586470 567 ntTSL 313.36□□□□□ -0.273e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.26□□□□□ -0.293e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC13.08□□□□□ -0.323e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC12.87□□□□□ -0.353e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-218ENST00000569105 696 ntTSL 212.86□□□□□ -0.353e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-204ENST00000558154 852 ntTSL 212.39□□□□□ -0.433e-6■□□□□ 8.3
SRSF1Q07955 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.433e-6■□□□□ 8.3
SRSF1Q07955 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.443e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-219ENST00000621185 462 ntTSL 212.14□□□□□ -0.473e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.473e-6■□□□□ 8.3
SRSF1Q07955 DEK-203ENST00000503715 580 ntTSL 511.96□□□□□ -0.493e-6■□□□□ 8.3
SRSF1Q07955 DEK-204ENST00000505224 1372 ntTSL 211.92□□□□□ -0.53e-6■□□□□ 8.3
SRSF1Q07955 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.523e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-203ENST00000557794 1196 ntTSL 511.07□□□□□ -0.643e-6■□□□□ 8.3
SRSF1Q07955 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.713e-6■□□□□ 8.3
SRSF1Q07955 SLC12A7-206ENST00000634447 3142 ntTSL 510.38□□□□□ -0.753e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-203ENST00000441922 359 ntTSL 1 (best)9.94□□□□□ -0.823e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-217ENST00000544096 3776 ntTSL 28.88□□□□□ -0.993e-6■□□□□ 8.3
SRSF1Q07955 ZNF556-201ENST00000307635 6574 ntAPPRIS P3 TSL 2 BASIC8.36□□□□□ -1.073e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-211ENST00000559605 379 ntTSL 37.98□□□□□ -1.133e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-213ENST00000560902 501 ntTSL 47.86□□□□□ -1.153e-6■□□□□ 8.3
SRSF1Q07955 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)7.7□□□□□ -1.183e-6■□□□□ 8.3
SRSF1Q07955 ORAOV1-216ENST00000543863 533 ntTSL 37.19□□□□□ -1.263e-6■□□□□ 8.3
SRSF1Q07955 CHMP4A-208ENST00000534106 370 ntTSL 53.29□□□□□ -1.883e-6■□□□□ 8.3
SRSF1Q07955 PYGB-201ENST00000216962 4134 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.147e-8■□□□□ 8.3
SRSF1Q07955 DDX39B-210ENST00000431908 914 ntTSL 511.61□□□□□ -0.552e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC11.55□□□□□ -0.562e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-220ENST00000482195 1232 ntTSL 210.3□□□□□ -0.762e-26■□□□□ 8.3
SRSF1Q07955 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.922e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-219ENST00000481456 5158 ntTSL 29.32□□□□□ -0.922e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-221ENST00000484566 857 ntTSL 59.32□□□□□ -0.922e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.922e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-202ENST00000396172 2133 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.052e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-215ENST00000462256 4027 ntTSL 27.67□□□□□ -1.182e-26■□□□□ 8.3
SRSF1Q07955 DDX39B-207ENST00000427214 1005 ntTSL 56.35□□□□□ -1.392e-26■□□□□ 8.3
SRSF1Q07955 EIF3D-204ENST00000426531 710 ntTSL 29.16□□□□□ -0.941e-11■□□□□ 8.3
SRSF1Q07955 MICALL2-211ENST00000487156 874 ntTSL 518.38■□□□□ 0.532e-12■□□□□ 8.3
SRSF1Q07955 SRRM2-226ENST00000576415 461 ntTSL 223.79■■□□□ 1.42e-10■□□□□ 8.3
SRSF1Q07955 SRRM2-223ENST00000575701 860 ntTSL 323.37■■□□□ 1.332e-10■□□□□ 8.3
SRSF1Q07955 SRRM2-219ENST00000574340 579 ntTSL 317.04■□□□□ 0.322e-10■□□□□ 8.3
SRSF1Q07955 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.666e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-204ENST00000563995 589 ntTSL 319.14■□□□□ 0.656e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-206ENST00000565081 1558 ntTSL 218.19■□□□□ 0.56e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.456e-8■□□□□ 8.2
SRSF1Q07955 WDR90-206ENST00000546923 742 ntTSL 517.1■□□□□ 0.336e-8■□□□□ 8.2
SRSF1Q07955 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.126e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-SULT1A3-204ENST00000567520 2227 ntTSL 215.37■□□□□ 0.056e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-SULT1A3-201ENST00000561824 1838 ntTSL 215.09■□□□□ 0.016e-8■□□□□ 8.2
SRSF1Q07955 WDR90-222ENST00000552683 2342 ntTSL 214.85□□□□□ -0.036e-8■□□□□ 8.2
SRSF1Q07955 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.096e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-SULT1A3-205ENST00000568997 2834 ntTSL 214.41□□□□□ -0.16e-8■□□□□ 8.2
SRSF1Q07955 WDR90-214ENST00000549024 2257 ntTSL 213.98□□□□□ -0.176e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-SULT1A3-206ENST00000569959 2424 ntTSL 213.96□□□□□ -0.176e-8■□□□□ 8.2
SRSF1Q07955 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.95□□□□□ -0.186e-8■□□□□ 8.2
SRSF1Q07955 SUPT4H1-205ENST00000581166 1401 ntTSL 213.2□□□□□ -0.36e-8■□□□□ 8.2
SRSF1Q07955 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.316e-8■□□□□ 8.2
SRSF1Q07955 WDR90-211ENST00000548603 522 ntTSL 313.09□□□□□ -0.316e-8■□□□□ 8.2
SRSF1Q07955 SUPT4H1-203ENST00000579289 318 ntTSL 311.9□□□□□ -0.56e-8■□□□□ 8.2
SRSF1Q07955 WDR90-223ENST00000552728 3133 ntTSL 511.55□□□□□ -0.566e-8■□□□□ 8.2
SRSF1Q07955 WDR90-204ENST00000546516 3593 ntTSL 210.59□□□□□ -0.716e-8■□□□□ 8.2
SRSF1Q07955 WDR90-207ENST00000547407 3847 ntTSL 210.59□□□□□ -0.716e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-210ENST00000582131 942 ntTSL 522.94■■□□□ 1.266e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-215ENST00000585077 1139 ntTSL 222.1■■□□□ 1.136e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-212ENST00000582429 1824 ntTSL 220.04■□□□□ 0.86e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-213ENST00000583354 686 ntTSL 519.07■□□□□ 0.646e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.69■□□□□ 0.586e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-204ENST00000578130 853 ntTSL 216.16■□□□□ 0.186e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.126e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.1■□□□□ 0.016e-8■□□□□ 8.2
SRSF1Q07955 HEXDC-205ENST00000578616 862 ntTSL 312.42□□□□□ -0.426e-8■□□□□ 8.2
SRSF1Q07955 DYRK1A-206ENST00000455097 338 ntTSL 1 (best)10.47□□□□□ -0.731e-7■□□□□ 8.2
SRSF1Q07955 DYRK1A-205ENST00000426672 519 ntTSL 53.51□□□□□ -1.851e-7■□□□□ 8.2
SRSF1Q07955 FGFR3-207ENST00000474521 545 ntTSL 216.22■□□□□ 0.196e-12■□□□□ 8.2
SRSF1Q07955 SRSF5-208ENST00000554929 947 ntTSL 210.72□□□□□ -0.696e-12■□□□□ 8.2
SRSF1Q07955 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.65■■□□□ 1.064e-11■□□□□ 8.2
SRSF1Q07955 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.99■□□□□ 0.637e-7■□□□□ 8.2
SRSF1Q07955 TMC6-220ENST00000591756 475 ntTSL 217.09■□□□□ 0.334e-11■□□□□ 8.2
SRSF1Q07955 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.36■□□□□ 0.214e-11■□□□□ 8.2
SRSF1Q07955 TMC6-222ENST00000592076 693 ntTSL 315.11■□□□□ 0.014e-11■□□□□ 8.2
SRSF1Q07955 ZNF767P-206ENST00000513792 565 ntBASIC14.69□□□□□ -0.067e-7■□□□□ 8.2
SRSF1Q07955 ZNF767P-204ENST00000486492 1616 ntTSL 214.02□□□□□ -0.167e-7■□□□□ 8.2
SRSF1Q07955 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.174e-11■□□□□ 8.2
SRSF1Q07955 NUP54-205ENST00000507257 1938 ntTSL 513.96□□□□□ -0.177e-7■□□□□ 8.2
SRSF1Q07955 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.224e-11■□□□□ 8.2
SRSF1Q07955 NUP54-214ENST00000514307 566 ntTSL 413.28□□□□□ -0.287e-7■□□□□ 8.2
SRSF1Q07955 NUP54-213ENST00000513352 579 ntTSL 413.25□□□□□ -0.297e-7■□□□□ 8.2
SRSF1Q07955 NUP54-216ENST00000514901 500 ntTSL 312.9□□□□□ -0.347e-7■□□□□ 8.2
SRSF1Q07955 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.364e-11■□□□□ 8.2
SRSF1Q07955 TMC6-224ENST00000593044 3070 ntTSL 212.66□□□□□ -0.384e-11■□□□□ 8.2
SRSF1Q07955 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.43□□□□□ -0.427e-7■□□□□ 8.2
SRSF1Q07955 SUGP2-211ENST00000598240 3235 ntTSL 211.67□□□□□ -0.547e-7■□□□□ 8.2
Retrieved 100 of 14,836 protein–RNA pairs in 265.9 ms