Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 EIF4B-204ENST00000549077 885 ntTSL 58.28□□□□□ -1.083e-15■■□□□ 12.3
MATR3P43243 EIF4B-211ENST00000551002 537 ntTSL 45.5□□□□□ -1.533e-15■■□□□ 12.3
MATR3P43243 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC26.28■■□□□ 1.82e-8■■□□□ 12.3
MATR3P43243 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.412e-8■■□□□ 12.3
MATR3P43243 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.32e-8■■□□□ 12.3
MATR3P43243 OARD1-213ENST00000482853 1245 ntTSL 220.86■□□□□ 0.932e-8■■□□□ 12.3
MATR3P43243 DISC1-207ENST00000422590 2939 ntTSL 1 (best)20.77■□□□□ 0.922e-8■■□□□ 12.3
MATR3P43243 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.782e-8■■□□□ 12.3
MATR3P43243 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.552e-8■■□□□ 12.3
MATR3P43243 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.282e-8■■□□□ 12.3
MATR3P43243 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.222e-8■■□□□ 12.3
MATR3P43243 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.1■□□□□ 0.172e-8■■□□□ 12.3
MATR3P43243 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.112e-8■■□□□ 12.3
MATR3P43243 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.082e-8■■□□□ 12.3
MATR3P43243 IL1RAP-208ENST00000422625 534 ntTSL 415.17■□□□□ 0.022e-8■■□□□ 12.3
MATR3P43243 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.242e-8■■□□□ 12.3
MATR3P43243 IL1RAP-207ENST00000422485 2048 ntTSL 1 (best) BASIC13.18□□□□□ -0.32e-8■■□□□ 12.3
MATR3P43243 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC12.78□□□□□ -0.362e-8■■□□□ 12.3
MATR3P43243 TTC27-201ENST00000317907 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.512e-8■■□□□ 12.3
MATR3P43243 RERE-209ENST00000467350 410 ntTSL 311.33□□□□□ -0.62e-8■■□□□ 12.3
MATR3P43243 GCLC-204ENST00000505197 592 ntTSL 410.28□□□□□ -0.762e-8■■□□□ 12.3
MATR3P43243 GCLC-208ENST00000513939 519 ntTSL 210.26□□□□□ -0.772e-8■■□□□ 12.3
MATR3P43243 TTC27-203ENST00000433416 660 ntTSL 310.16□□□□□ -0.782e-8■■□□□ 12.3
MATR3P43243 DIP2B-202ENST00000546719 2297 ntTSL 1 (best)9.3□□□□□ -0.922e-8■■□□□ 12.3
MATR3P43243 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.992e-8■■□□□ 12.3
MATR3P43243 IL1RAP-203ENST00000342550 4490 ntTSL 28.61□□□□□ -1.032e-8■■□□□ 12.3
MATR3P43243 DISC1-208ENST00000427560 545 ntTSL 38.54□□□□□ -1.042e-8■■□□□ 12.3
MATR3P43243 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.43□□□□□ -1.062e-8■■□□□ 12.3
MATR3P43243 SYNJ2-IT1-201ENST00000442328 599 ntTSL 3 BASIC8.21□□□□□ -1.13e-6■■□□□ 12.3
MATR3P43243 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.122e-8■■□□□ 12.3
MATR3P43243 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.74□□□□□ -1.172e-8■■□□□ 12.3
MATR3P43243 IL1RAP-206ENST00000413869 4577 ntTSL 27.38□□□□□ -1.232e-8■■□□□ 12.3
MATR3P43243 IL1RAP-214ENST00000453359 523 ntTSL 47.22□□□□□ -1.252e-8■■□□□ 12.3
MATR3P43243 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.372e-8■■□□□ 12.3
MATR3P43243 ZNF655-220ENST00000488751 924 ntTSL 316.8■□□□□ 0.282e-7■■□□□ 12.3
MATR3P43243 CADM1-205ENST00000536781 575 ntTSL 421.13■□□□□ 0.976e-8■■□□□ 12.2
MATR3P43243 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.831e-6■■□□□ 12.2
MATR3P43243 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.724e-10■■□□□ 12.2
MATR3P43243 RPS6KA3-205ENST00000479809 847 ntTSL 56.23□□□□□ -1.414e-7■■□□□ 12.2
MATR3P43243 WDR20-213ENST00000557485 491 ntTSL 321.02■□□□□ 0.964e-6■■□□□ 12.2
MATR3P43243 WDR20-209ENST00000556094 785 ntTSL 319.71■□□□□ 0.754e-6■■□□□ 12.2
MATR3P43243 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.31■□□□□ 0.524e-6■■□□□ 12.2
MATR3P43243 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.15■□□□□ 0.344e-6■■□□□ 12.2
MATR3P43243 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC17.05■□□□□ 0.324e-6■■□□□ 12.2
MATR3P43243 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.8■□□□□ 0.284e-6■■□□□ 12.2
MATR3P43243 WDR20-204ENST00000342702 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.474e-6■■□□□ 12.2
MATR3P43243 WDR20-220ENST00000561154 541 ntTSL 411.84□□□□□ -0.514e-6■■□□□ 12.2
MATR3P43243 WDR20-216ENST00000558567 586 ntTSL 5 BASIC11.81□□□□□ -0.524e-6■■□□□ 12.2
MATR3P43243 WDR20-210ENST00000556511 2117 ntTSL 1 (best) BASIC11.77□□□□□ -0.534e-6■■□□□ 12.2
MATR3P43243 WDR20-207ENST00000555879 2175 ntTSL 211.16□□□□□ -0.624e-6■■□□□ 12.2
MATR3P43243 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC10.77□□□□□ -0.684e-6■■□□□ 12.2
MATR3P43243 WDR20-206ENST00000454394 2067 ntTSL 2 BASIC10.08□□□□□ -0.84e-6■■□□□ 12.2
MATR3P43243 WDR20-212ENST00000557186 631 ntTSL 39.69□□□□□ -0.864e-6■■□□□ 12.2
MATR3P43243 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.063e-6■■□□□ 12.2
MATR3P43243 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.32□□□□□ -1.243e-6■■□□□ 12.2
MATR3P43243 IBTK-205ENST00000503400 5239 ntTSL 1 (best)7.08□□□□□ -1.283e-6■■□□□ 12.2
MATR3P43243 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.19□□□□□ -1.423e-6■■□□□ 12.2
MATR3P43243 IBTK-204ENST00000471036 721 ntTSL 35.45□□□□□ -1.543e-6■■□□□ 12.2
MATR3P43243 IBTK-203ENST00000445419 3663 ntTSL 24.66□□□□□ -1.663e-6■■□□□ 12.2
MATR3P43243 DOCK7-231ENST00000637255 4071 ntTSL 54.61□□□□□ -1.678e-7■■□□□ 12.2
MATR3P43243 WDR20-217ENST00000558854 532 ntTSL 24.2□□□□□ -1.744e-6■■□□□ 12.2
MATR3P43243 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.97□□□□□ -1.773e-6■■□□□ 12.2
MATR3P43243 IBTK-207ENST00000505222 5547 ntTSL 1 (best)3.9□□□□□ -1.783e-6■■□□□ 12.2
MATR3P43243 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.411e-6■■□□□ 12.2
MATR3P43243 USP15-219ENST00000552997 533 ntTSL 42.72□□□□□ -1.975e-7■■□□□ 12.2
MATR3P43243 ZFX-207ENST00000459724 673 ntTSL 525.38■■□□□ 1.651e-6■■□□□ 12.1
MATR3P43243 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.19□□□□□ -0.941e-6■■□□□ 12.1
MATR3P43243 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.051e-6■■□□□ 12.1
MATR3P43243 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC7.86□□□□□ -1.151e-6■■□□□ 12.1
MATR3P43243 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.37□□□□□ -1.391e-6■■□□□ 12.1
MATR3P43243 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.461e-6■■□□□ 12.1
MATR3P43243 DCAF7-202ENST00000431926 1354 ntTSL 1 (best)16.13■□□□□ 0.178e-14■■□□□ 12.1
MATR3P43243 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC15.34■□□□□ 0.058e-14■■□□□ 12.1
MATR3P43243 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.448e-14■■□□□ 12.1
MATR3P43243 DCAF7-203ENST00000580091 325 ntTSL 310.67□□□□□ -0.78e-14■■□□□ 12.1
MATR3P43243 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.64□□□□□ -1.357e-9■■□□□ 12.1
MATR3P43243 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.547e-9■■□□□ 12.1
MATR3P43243 ING3-203ENST00000427726 1718 ntTSL 1 (best)4.73□□□□□ -1.657e-9■■□□□ 12.1
MATR3P43243 SYNJ2-206ENST00000485863 810 ntTSL 320.25■□□□□ 0.832e-11■■□□□ 12.1
MATR3P43243 SYNJ2-207ENST00000638626 7332 ntTSL 1 (best) BASIC12.09□□□□□ -0.472e-11■■□□□ 12.1
MATR3P43243 NEAT1-202ENST00000501122 22743 ntBASIC5.41□□□□□ -1.543e-25■■□□□ 12.1
MATR3P43243 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 18e-7■■□□□ 12.1
MATR3P43243 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.728e-7■■□□□ 12.1
MATR3P43243 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.33■□□□□ 0.688e-7■■□□□ 12.1
MATR3P43243 ZNF248-206ENST00000485560 1705 ntTSL 1 (best)17.6■□□□□ 0.418e-7■■□□□ 12.1
MATR3P43243 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC13.91□□□□□ -0.183e-8■■□□□ 12.1
MATR3P43243 DLC1-206ENST00000509922 455 ntTSL 411.02□□□□□ -0.653e-8■■□□□ 12.1
MATR3P43243 DLC1-204ENST00000503161 562 ntTSL 410.94□□□□□ -0.663e-8■■□□□ 12.1
MATR3P43243 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC10.61□□□□□ -0.713e-8■■□□□ 12.1
MATR3P43243 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC8.37□□□□□ -1.073e-8■■□□□ 12.1
MATR3P43243 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.89□□□□□ -1.318e-7■■□□□ 12.1
MATR3P43243 DLC1-205ENST00000506171 560 ntTSL 44.55□□□□□ -1.683e-8■■□□□ 12.1
MATR3P43243 KIF16B-204ENST00000450176 556 ntTSL 52.94□□□□□ -1.948e-7■■□□□ 12.1
MATR3P43243 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.97■□□□□ 0.791e-12■■□□□ 12.1
MATR3P43243 ACSF3-211ENST00000540697 829 ntTSL 219.62■□□□□ 0.731e-12■■□□□ 12.1
MATR3P43243 ACSF3-213ENST00000542688 2024 ntTSL 519■□□□□ 0.631e-12■■□□□ 12.1
MATR3P43243 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.521e-12■■□□□ 12.1
MATR3P43243 ACSF3-214ENST00000543676 940 ntTSL 217.51■□□□□ 0.391e-12■■□□□ 12.1
MATR3P43243 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.041e-12■■□□□ 12.1
MATR3P43243 ACSF3-215ENST00000544543 883 ntTSL 514.32□□□□□ -0.121e-12■■□□□ 12.1
Retrieved 100 of 16,209 protein–RNA pairs in 246.9 ms