Protein–RNA interactions for Protein: P41230

Kdm5c, Lysine-specific demethylase 5C, mousemouse

Predictions only

Length 1,554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm5cP41230 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm5cP41230 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Kdm5cP41230 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm5cP41230 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm5cP41230 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Kdm5cP41230 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm27501-201ENSMUST00000183599 107 ntBASIC20.59■□□□□ 0.89
Kdm5cP41230 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Kdm5cP41230 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC20.59■□□□□ 0.89
Kdm5cP41230 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm27516-201ENSMUST00000184237 98 ntBASIC20.59■□□□□ 0.89
Kdm5cP41230 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.59■□□□□ 0.89
Kdm5cP41230 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC20.59■□□□□ 0.89
Kdm5cP41230 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Kdm5cP41230 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC20.58■□□□□ 0.89
Kdm5cP41230 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm5cP41230 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC20.58■□□□□ 0.89
Kdm5cP41230 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm5cP41230 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Kdm5cP41230 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm5cP41230 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm5cP41230 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Kdm5cP41230 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Gm5687-201ENSMUST00000118252 640 ntBASIC20.58■□□□□ 0.88
Kdm5cP41230 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC20.58■□□□□ 0.88
Kdm5cP41230 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Kdm5cP41230 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC20.58■□□□□ 0.88
Kdm5cP41230 Gm45880-201ENSMUST00000213041 853 ntBASIC20.58■□□□□ 0.88
Kdm5cP41230 Cts7-204ENSMUST00000225321 1257 ntBASIC20.58■□□□□ 0.88
Kdm5cP41230 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm5cP41230 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Kdm5cP41230 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Kdm5cP41230 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC20.57■□□□□ 0.88
Kdm5cP41230 Gm38266-201ENSMUST00000194931 421 ntBASIC20.57■□□□□ 0.88
Kdm5cP41230 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm5cP41230 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm5cP41230 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm5cP41230 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC20.56■□□□□ 0.88
Kdm5cP41230 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC20.56■□□□□ 0.88
Kdm5cP41230 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC20.56■□□□□ 0.88
Kdm5cP41230 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm5cP41230 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm5cP41230 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Kdm5cP41230 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm5cP41230 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.55■□□□□ 0.88
Kdm5cP41230 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC20.55■□□□□ 0.88
Kdm5cP41230 Gm5069-202ENSMUST00000192714 1011 ntBASIC20.55■□□□□ 0.88
Kdm5cP41230 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC20.55■□□□□ 0.88
Kdm5cP41230 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC20.55■□□□□ 0.88
Kdm5cP41230 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Gm5620-201ENSMUST00000077991 1348 ntBASIC20.55■□□□□ 0.88
Kdm5cP41230 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm5cP41230 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms