Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CLCC1-201ENST00000302500 1316 ntTSL 1 (best) BASIC10.69□□□□□ -0.72e-6■□□□□ 8.5
SRSF1Q07955 QARS-213ENST00000470619 876 ntTSL 410.65□□□□□ -0.72e-6■□□□□ 8.5
SRSF1Q07955 QARS-238ENST00000635231 578 ntTSL 410.38□□□□□ -0.752e-6■□□□□ 8.5
SRSF1Q07955 QARS-244ENST00000635501 1290 ntTSL 210.25□□□□□ -0.772e-6■□□□□ 8.5
SRSF1Q07955 QARS-251ENST00000637543 2074 ntTSL 510.05□□□□□ -0.82e-6■□□□□ 8.5
SRSF1Q07955 QARS-246ENST00000635622 701 ntTSL 310.05□□□□□ -0.82e-6■□□□□ 8.5
SRSF1Q07955 QARS-248ENST00000636669 2410 ntTSL 59.88□□□□□ -0.832e-6■□□□□ 8.5
SRSF1Q07955 QARS-236ENST00000635052 570 ntTSL 59.88□□□□□ -0.832e-6■□□□□ 8.5
SRSF1Q07955 QARS-234ENST00000634802 599 ntTSL 49.88□□□□□ -0.832e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC9.77□□□□□ -0.852e-6■□□□□ 8.5
SRSF1Q07955 QARS-230ENST00000634527 732 ntTSL 59.72□□□□□ -0.852e-6■□□□□ 8.5
SRSF1Q07955 QARS-227ENST00000634425 520 ntTSL 59.7□□□□□ -0.862e-6■□□□□ 8.5
SRSF1Q07955 QARS-205ENST00000430182 2399 ntTSL 29.69□□□□□ -0.862e-6■□□□□ 8.5
SRSF1Q07955 QARS-202ENST00000414533 2412 ntTSL 2 BASIC9.67□□□□□ -0.862e-6■□□□□ 8.5
SRSF1Q07955 QARS-215ENST00000479495 577 ntTSL 49.51□□□□□ -0.892e-6■□□□□ 8.5
SRSF1Q07955 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC9.5□□□□□ -0.892e-6■□□□□ 8.5
SRSF1Q07955 QARS-203ENST00000417025 572 ntTSL 59.33□□□□□ -0.922e-6■□□□□ 8.5
SRSF1Q07955 NCOA6-201ENST00000359003 7081 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.982e-6■□□□□ 8.5
SRSF1Q07955 QARS-247ENST00000636018 2171 ntTSL 58.79□□□□□ -12e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-206ENST00000369970 2078 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.032e-6■□□□□ 8.5
SRSF1Q07955 QARS-240ENST00000635292 574 ntTSL 48.35□□□□□ -1.072e-6■□□□□ 8.5
SRSF1Q07955 QARS-226ENST00000634359 437 ntTSL 58.28□□□□□ -1.082e-6■□□□□ 8.5
SRSF1Q07955 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.092e-6■□□□□ 8.5
SRSF1Q07955 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.482e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.492e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.07□□□□□ -1.62e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.96□□□□□ -1.622e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-208ENST00000473062 319 ntTSL 33.71□□□□□ -1.822e-6■□□□□ 8.5
SRSF1Q07955 CLCC1-209ENST00000482889 752 ntTSL 33.48□□□□□ -1.852e-6■□□□□ 8.5
SRSF1Q07955 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.126e-8■□□□□ 8.5
SRSF1Q07955 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.026e-8■□□□□ 8.5
SRSF1Q07955 STK11-206ENST00000586358 770 ntTSL 513.87□□□□□ -0.196e-8■□□□□ 8.5
SRSF1Q07955 STK11-204ENST00000585851 505 ntTSL 313.42□□□□□ -0.266e-8■□□□□ 8.5
SRSF1Q07955 STK11-209ENST00000593219 637 ntTSL 313.05□□□□□ -0.326e-8■□□□□ 8.5
SRSF1Q07955 STK11-207ENST00000589152 3365 ntTSL 212.25□□□□□ -0.456e-8■□□□□ 8.5
SRSF1Q07955 STK11-203ENST00000585748 746 ntTSL 311.69□□□□□ -0.546e-8■□□□□ 8.5
SRSF1Q07955 BSDC1-208ENST00000474414 978 ntTSL 521.08■□□□□ 0.974e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-208ENST00000470643 852 ntTSL 320.8■□□□□ 0.924e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-210ENST00000484168 1101 ntTSL 520.8■□□□□ 0.924e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-202ENST00000413165 856 ntTSL 519.08■□□□□ 0.644e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.554e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-204ENST00000526733 496 ntTSL 218.42■□□□□ 0.544e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.12■□□□□ 0.494e-7■□□□□ 8.4
SRSF1Q07955 BSDC1-213ENST00000530753 571 ntTSL 416.8■□□□□ 0.284e-7■□□□□ 8.4
SRSF1Q07955 DDX56-210ENST00000479440 599 ntTSL 216.46■□□□□ 0.234e-7■□□□□ 8.4
SRSF1Q07955 BSDC1-214ENST00000530876 570 ntTSL 216.36■□□□□ 0.214e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-212ENST00000487376 1583 ntTSL 516.07■□□□□ 0.164e-7■□□□□ 8.4
SRSF1Q07955 DDX56-202ENST00000415758 1287 ntTSL 515.51■□□□□ 0.074e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-209ENST00000476729 562 ntTSL 215.03■□□□□ -04e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-207ENST00000454845 629 ntTSL 314.89□□□□□ -0.034e-7■□□□□ 8.4
SRSF1Q07955 KEL-206ENST00000476829 649 ntTSL 314.81□□□□□ -0.044e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-204ENST00000418160 457 ntTSL 314.18□□□□□ -0.144e-7■□□□□ 8.4
SRSF1Q07955 LRRC41-205ENST00000498402 2068 ntTSL 213.35□□□□□ -0.274e-7■□□□□ 8.4
SRSF1Q07955 BSDC1-210ENST00000527163 567 ntTSL 513.13□□□□□ -0.314e-7■□□□□ 8.4
SRSF1Q07955 BSDC1-211ENST00000527513 576 ntTSL 513.13□□□□□ -0.314e-7■□□□□ 8.4
SRSF1Q07955 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.334e-7■□□□□ 8.4
SRSF1Q07955 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.354e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-205ENST00000438162 888 ntTSL 512.66□□□□□ -0.384e-7■□□□□ 8.4
SRSF1Q07955 MED28-203ENST00000503945 879 ntTSL 1 (best)11.71□□□□□ -0.534e-7■□□□□ 8.4
SRSF1Q07955 BSDC1-212ENST00000530485 482 ntTSL 511.63□□□□□ -0.554e-7■□□□□ 8.4
SRSF1Q07955 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.554e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-203ENST00000416018 592 ntTSL 311.32□□□□□ -0.64e-7■□□□□ 8.4
SRSF1Q07955 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.614e-7■□□□□ 8.4
SRSF1Q07955 DDX56-206ENST00000446987 1853 ntTSL 511.19□□□□□ -0.624e-7■□□□□ 8.4
SRSF1Q07955 KEL-208ENST00000479768 1856 ntTSL 510.92□□□□□ -0.664e-7■□□□□ 8.4
SRSF1Q07955 BSDC1-216ENST00000533084 564 ntTSL 310.92□□□□□ -0.664e-7■□□□□ 8.4
SRSF1Q07955 FLOT1-206ENST00000445853 792 ntTSL 1 (best)10.84□□□□□ -0.674e-7■□□□□ 8.4
SRSF1Q07955 KEL-209ENST00000494148 417 ntTSL 310.82□□□□□ -0.684e-7■□□□□ 8.4
SRSF1Q07955 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC10.63□□□□□ -0.714e-7■□□□□ 8.4
SRSF1Q07955 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC10.19□□□□□ -0.784e-7■□□□□ 8.4
SRSF1Q07955 LRRC41-207ENST00000617190 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.954e-7■□□□□ 8.4
SRSF1Q07955 FAF1-201ENST00000371778 1643 ntTSL 1 (best) BASIC8.9□□□□□ -0.994e-7■□□□□ 8.4
SRSF1Q07955 LRRC41-203ENST00000472710 4455 ntTSL 28.39□□□□□ -1.074e-7■□□□□ 8.4
SRSF1Q07955 DDX56-203ENST00000421223 3028 ntTSL 28.35□□□□□ -1.074e-7■□□□□ 8.4
SRSF1Q07955 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.174e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-203ENST00000525018 753 ntTSL 57.51□□□□□ -1.214e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC6.71□□□□□ -1.344e-7■□□□□ 8.4
SRSF1Q07955 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.44e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.434e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-206ENST00000529023 1095 ntTSL 25.91□□□□□ -1.464e-7■□□□□ 8.4
SRSF1Q07955 LRRC41-202ENST00000469150 3389 ntTSL 1 (best)5.8□□□□□ -1.484e-7■□□□□ 8.4
SRSF1Q07955 TMEM135-208ENST00000531800 201 ntTSL 52.89□□□□□ -1.954e-7■□□□□ 8.4
SRSF1Q07955 PRPF38A-203ENST00000487160 926 ntTSL 25.07□□□□□ -1.63e-9■□□□□ 8.4
SRSF1Q07955 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.89■■□□□ 1.91e-6■□□□□ 8.4
SRSF1Q07955 EPS8L2-222ENST00000532545 419 ntTSL 321.48■■□□□ 1.031e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-206ENST00000537157 479 ntTSL 221.47■■□□□ 1.031e-6■□□□□ 8.4
SRSF1Q07955 EPS8L2-221ENST00000531471 448 ntTSL 321.46■■□□□ 1.031e-6■□□□□ 8.4
SRSF1Q07955 RHOF-207ENST00000546227 1219 ntTSL 521.32■■□□□ 11e-6■□□□□ 8.4
SRSF1Q07955 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.711e-6■□□□□ 8.4
SRSF1Q07955 PKD1-221ENST00000488185 737 ntTSL 519.25■□□□□ 0.671e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.73■□□□□ 0.431e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-201ENST00000428029 1024 ntTSL 217.63■□□□□ 0.411e-6■□□□□ 8.4
SRSF1Q07955 PIGG-216ENST00000508669 584 ntTSL 217.38■□□□□ 0.371e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-210ENST00000543167 1059 ntTSL 217.38■□□□□ 0.371e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-203ENST00000535614 480 ntTSL 416.92■□□□□ 0.31e-6■□□□□ 8.4
SRSF1Q07955 PKD1-238ENST00000570150 571 ntTSL 516.49■□□□□ 0.231e-6■□□□□ 8.4
SRSF1Q07955 RHOF-206ENST00000545544 826 ntTSL 515.36■□□□□ 0.051e-6■□□□□ 8.4
SRSF1Q07955 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.35■□□□□ 0.051e-6■□□□□ 8.4
SRSF1Q07955 RHOF-205ENST00000541657 1626 ntTSL 515.29■□□□□ 0.041e-6■□□□□ 8.4
SRSF1Q07955 FILIP1L-207ENST00000476723 567 ntTSL 415.23■□□□□ 0.032e-9■□□□□ 8.4
Retrieved 100 of 14,836 protein–RNA pairs in 274.5 ms