Protein–RNA interactions for Protein: Q9Z0M3

Cdh20, Cadherin-20, mousemouse

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh20Q9Z0M3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cdh20Q9Z0M3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cdh20Q9Z0M3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.42■□□□□ 0.86
Cdh20Q9Z0M3 Gm16437-201ENSMUST00000025669 507 ntBASIC20.42■□□□□ 0.86
Cdh20Q9Z0M3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh20Q9Z0M3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cdh20Q9Z0M3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.41■□□□□ 0.86
Cdh20Q9Z0M3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cdh20Q9Z0M3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cdh20Q9Z0M3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh20Q9Z0M3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh20Q9Z0M3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh20Q9Z0M3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cdh20Q9Z0M3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cdh20Q9Z0M3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh20Q9Z0M3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh20Q9Z0M3 Gm44428-201ENSMUST00000204474 874 ntBASIC20.38■□□□□ 0.85
Cdh20Q9Z0M3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh20Q9Z0M3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.38■□□□□ 0.85
Cdh20Q9Z0M3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cdh20Q9Z0M3 Gm11687-201ENSMUST00000118911 886 ntBASIC20.37■□□□□ 0.85
Cdh20Q9Z0M3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh20Q9Z0M3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cdh20Q9Z0M3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cdh20Q9Z0M3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh20Q9Z0M3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cdh20Q9Z0M3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cdh20Q9Z0M3 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.35■□□□□ 0.85
Cdh20Q9Z0M3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cdh20Q9Z0M3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh20Q9Z0M3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh20Q9Z0M3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh20Q9Z0M3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.32■□□□□ 0.84
Cdh20Q9Z0M3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh20Q9Z0M3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh20Q9Z0M3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh20Q9Z0M3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh20Q9Z0M3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh20Q9Z0M3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh20Q9Z0M3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh20Q9Z0M3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Cdh20Q9Z0M3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh20Q9Z0M3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cdh20Q9Z0M3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh20Q9Z0M3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh20Q9Z0M3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cdh20Q9Z0M3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh20Q9Z0M3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh20Q9Z0M3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdh20Q9Z0M3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh20Q9Z0M3 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.26■□□□□ 0.83
Cdh20Q9Z0M3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh20Q9Z0M3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh20Q9Z0M3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.25■□□□□ 0.83
Cdh20Q9Z0M3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.25■□□□□ 0.83
Cdh20Q9Z0M3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms