Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
PTCH2Q9Y6C5 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.03■■■□□ 2.08
PTCH2Q9Y6C5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
PTCH2Q9Y6C5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC28.03■■■□□ 2.08
PTCH2Q9Y6C5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC28.02■■■□□ 2.08
PTCH2Q9Y6C5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
PTCH2Q9Y6C5 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.01■■■□□ 2.07
PTCH2Q9Y6C5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 RPS2P7-201ENST00000447334 885 ntBASIC28■■■□□ 2.07
PTCH2Q9Y6C5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28■■■□□ 2.07
PTCH2Q9Y6C5 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
PTCH2Q9Y6C5 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
PTCH2Q9Y6C5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.98■■■□□ 2.07
PTCH2Q9Y6C5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
PTCH2Q9Y6C5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
PTCH2Q9Y6C5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC27.96■■■□□ 2.07
PTCH2Q9Y6C5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
PTCH2Q9Y6C5 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.95■■■□□ 2.07
PTCH2Q9Y6C5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
PTCH2Q9Y6C5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC27.95■■■□□ 2.06
PTCH2Q9Y6C5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 TSPY9P-201ENST00000440215 945 ntBASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 TSPY11P-201ENST00000442607 1045 ntBASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 AC131281.2-201ENST00000520478 145 ntBASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.94■■■□□ 2.06
PTCH2Q9Y6C5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
PTCH2Q9Y6C5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
PTCH2Q9Y6C5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PTCH2Q9Y6C5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
PTCH2Q9Y6C5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
PTCH2Q9Y6C5 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
PTCH2Q9Y6C5 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.89■■■□□ 2.05
PTCH2Q9Y6C5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PTCH2Q9Y6C5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 AL136116.3-201ENST00000402907 1138 ntBASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 AC110285.6-201ENST00000617652 491 ntBASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
PTCH2Q9Y6C5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCH2Q9Y6C5 SRR-208ENST00000576848 588 ntTSL 4 BASIC27.86■■■□□ 2.05
PTCH2Q9Y6C5 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PTCH2Q9Y6C5 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
PTCH2Q9Y6C5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.85■■■□□ 2.05
PTCH2Q9Y6C5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC27.85■■■□□ 2.05
PTCH2Q9Y6C5 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PTCH2Q9Y6C5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms