Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHB13Q9Y5F0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHB13Q9Y5F0 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
PCDHB13Q9Y5F0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
PCDHB13Q9Y5F0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.91■■□□□ 1.9
PCDHB13Q9Y5F0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.91■■□□□ 1.9
PCDHB13Q9Y5F0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB13Q9Y5F0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHB13Q9Y5F0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHB13Q9Y5F0 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
PCDHB13Q9Y5F0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHB13Q9Y5F0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHB13Q9Y5F0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.89■■□□□ 1.89
PCDHB13Q9Y5F0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHB13Q9Y5F0 RNF126P1-201ENST00000567452 1320 ntBASIC26.89■■□□□ 1.89
PCDHB13Q9Y5F0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB13Q9Y5F0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
PCDHB13Q9Y5F0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB13Q9Y5F0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
PCDHB13Q9Y5F0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB13Q9Y5F0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHB13Q9Y5F0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB13Q9Y5F0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHB13Q9Y5F0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHB13Q9Y5F0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.87■■□□□ 1.89
PCDHB13Q9Y5F0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.87■■□□□ 1.89
PCDHB13Q9Y5F0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 MIR3960-201ENST00000583311 91 ntBASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 HSD17B1P1-201ENST00000590052 955 ntBASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.86■■□□□ 1.89
PCDHB13Q9Y5F0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHB13Q9Y5F0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC26.84■■□□□ 1.89
PCDHB13Q9Y5F0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB13Q9Y5F0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.84■■□□□ 1.89
PCDHB13Q9Y5F0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHB13Q9Y5F0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHB13Q9Y5F0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHB13Q9Y5F0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHB13Q9Y5F0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.82■■□□□ 1.88
PCDHB13Q9Y5F0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHB13Q9Y5F0 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHB13Q9Y5F0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
PCDHB13Q9Y5F0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.81■■□□□ 1.88
PCDHB13Q9Y5F0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHB13Q9Y5F0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHB13Q9Y5F0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDHB13Q9Y5F0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.8■■□□□ 1.88
PCDHB13Q9Y5F0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 AC007029.1-201ENST00000604183 313 ntBASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHB13Q9Y5F0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHB13Q9Y5F0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHB13Q9Y5F0 RP9P-202ENST00000450133 1212 ntBASIC26.78■■□□□ 1.88
PCDHB13Q9Y5F0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHB13Q9Y5F0 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB13Q9Y5F0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHB13Q9Y5F0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.77■■□□□ 1.88
PCDHB13Q9Y5F0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHB13Q9Y5F0 AC092803.2-201ENST00000564287 1899 ntBASIC26.76■■□□□ 1.88
PCDHB13Q9Y5F0 AC091060.1-201ENST00000623524 1766 ntBASIC26.76■■□□□ 1.88
PCDHB13Q9Y5F0 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHB13Q9Y5F0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.76■■□□□ 1.87
PCDHB13Q9Y5F0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.75■■□□□ 1.87
PCDHB13Q9Y5F0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB13Q9Y5F0 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
PCDHB13Q9Y5F0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
PCDHB13Q9Y5F0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.74■■□□□ 1.87
PCDHB13Q9Y5F0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PCDHB13Q9Y5F0 RARRES2P2-201ENST00000394842 485 ntBASIC26.74■■□□□ 1.87
PCDHB13Q9Y5F0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.73■■□□□ 1.87
PCDHB13Q9Y5F0 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 AC093536.1-201ENST00000569153 554 ntBASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHB13Q9Y5F0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms