Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Atp6ap1Q9R1Q9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Atp6ap1Q9R1Q9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6ap1Q9R1Q9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.6■■□□□ 1.05
Atp6ap1Q9R1Q9 Gm27502-201ENSMUST00000183495 199 ntBASIC21.6■■□□□ 1.05
Atp6ap1Q9R1Q9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.6■■□□□ 1.05
Atp6ap1Q9R1Q9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6ap1Q9R1Q9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Atp6ap1Q9R1Q9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6ap1Q9R1Q9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6ap1Q9R1Q9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.59■■□□□ 1.05
Atp6ap1Q9R1Q9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6ap1Q9R1Q9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6ap1Q9R1Q9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Atp6ap1Q9R1Q9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Atp6ap1Q9R1Q9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Atp6ap1Q9R1Q9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Atp6ap1Q9R1Q9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atp6ap1Q9R1Q9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Atp6ap1Q9R1Q9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Atp6ap1Q9R1Q9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Atp6ap1Q9R1Q9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Atp6ap1Q9R1Q9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Atp6ap1Q9R1Q9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Atp6ap1Q9R1Q9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atp6ap1Q9R1Q9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.54■■□□□ 1.04
Atp6ap1Q9R1Q9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Atp6ap1Q9R1Q9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.54■■□□□ 1.04
Atp6ap1Q9R1Q9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.54■■□□□ 1.04
Atp6ap1Q9R1Q9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.53■■□□□ 1.04
Atp6ap1Q9R1Q9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atp6ap1Q9R1Q9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Atp6ap1Q9R1Q9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Atp6ap1Q9R1Q9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Atp6ap1Q9R1Q9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Atp6ap1Q9R1Q9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm14523-201ENSMUST00000117260 558 ntBASIC21.51■■□□□ 1.03
Atp6ap1Q9R1Q9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Atp6ap1Q9R1Q9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Atp6ap1Q9R1Q9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp6ap1Q9R1Q9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp6ap1Q9R1Q9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.5■■□□□ 1.03
Atp6ap1Q9R1Q9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
Atp6ap1Q9R1Q9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Atp6ap1Q9R1Q9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.49■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.48■■□□□ 1.03
Atp6ap1Q9R1Q9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Atp6ap1Q9R1Q9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atp6ap1Q9R1Q9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Atp6ap1Q9R1Q9 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.48■■□□□ 1.03
Atp6ap1Q9R1Q9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Atp6ap1Q9R1Q9 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm12366-201ENSMUST00000121722 873 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm5786-201ENSMUST00000085368 882 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.47■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Atp6ap1Q9R1Q9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms