Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4bQ9JI43 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Rhox4bQ9JI43 Gm30023-201ENSMUST00000197970 889 ntBASIC17.75■□□□□ 0.43
Rhox4bQ9JI43 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rhox4bQ9JI43 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4bQ9JI43 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4bQ9JI43 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4bQ9JI43 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rhox4bQ9JI43 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4bQ9JI43 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rhox4bQ9JI43 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4bQ9JI43 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4bQ9JI43 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rhox4bQ9JI43 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Rhox4bQ9JI43 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4bQ9JI43 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.72■□□□□ 0.43
Rhox4bQ9JI43 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.72■□□□□ 0.43
Rhox4bQ9JI43 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4bQ9JI43 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rhox4bQ9JI43 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4bQ9JI43 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4bQ9JI43 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4bQ9JI43 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rhox4bQ9JI43 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rhox4bQ9JI43 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rhox4bQ9JI43 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rhox4bQ9JI43 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rhox4bQ9JI43 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rhox4bQ9JI43 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.66■□□□□ 0.42
Rhox4bQ9JI43 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rhox4bQ9JI43 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rhox4bQ9JI43 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rhox4bQ9JI43 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rhox4bQ9JI43 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.65■□□□□ 0.42
Rhox4bQ9JI43 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4bQ9JI43 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4bQ9JI43 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4bQ9JI43 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rhox4bQ9JI43 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rhox4bQ9JI43 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rhox4bQ9JI43 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rhox4bQ9JI43 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rhox4bQ9JI43 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rhox4bQ9JI43 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rhox4bQ9JI43 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rhox4bQ9JI43 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rhox4bQ9JI43 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rhox4bQ9JI43 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rhox4bQ9JI43 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rhox4bQ9JI43 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rhox4bQ9JI43 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rhox4bQ9JI43 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rhox4bQ9JI43 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rhox4bQ9JI43 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rhox4bQ9JI43 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rhox4bQ9JI43 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rhox4bQ9JI43 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms