Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB1BQ9H0U4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB1BQ9H0U4 BX255925.1-201ENST00000566954 1854 ntBASIC20.71■□□□□ 0.91
RAB1BQ9H0U4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 SPCS2P3-201ENST00000500401 656 ntBASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
RAB1BQ9H0U4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RAB1BQ9H0U4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAB1BQ9H0U4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.69■□□□□ 0.9
RAB1BQ9H0U4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.69■□□□□ 0.9
RAB1BQ9H0U4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB1BQ9H0U4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
RAB1BQ9H0U4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.68■□□□□ 0.9
RAB1BQ9H0U4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB1BQ9H0U4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB1BQ9H0U4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 RARRES2P1-201ENST00000474487 481 ntBASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
RAB1BQ9H0U4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB1BQ9H0U4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RAB1BQ9H0U4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB1BQ9H0U4 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB1BQ9H0U4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB1BQ9H0U4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB1BQ9H0U4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB1BQ9H0U4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RAB1BQ9H0U4 AC142086.6-201ENST00000621154 1765 ntBASIC20.64■□□□□ 0.9
RAB1BQ9H0U4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.64■□□□□ 0.89
RAB1BQ9H0U4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
RAB1BQ9H0U4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB1BQ9H0U4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RAB1BQ9H0U4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB1BQ9H0U4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
RAB1BQ9H0U4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAB1BQ9H0U4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.63■□□□□ 0.89
RAB1BQ9H0U4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
RAB1BQ9H0U4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RAB1BQ9H0U4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB1BQ9H0U4 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAB1BQ9H0U4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB1BQ9H0U4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.62■□□□□ 0.89
RAB1BQ9H0U4 AC010980.1-201ENST00000587192 1142 ntBASIC20.62■□□□□ 0.89
RAB1BQ9H0U4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.61■□□□□ 0.89
RAB1BQ9H0U4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 KRT18P10-201ENST00000388836 1287 ntBASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB1BQ9H0U4 AC142472.1-201ENST00000612013 1741 ntBASIC20.59■□□□□ 0.89
RAB1BQ9H0U4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB1BQ9H0U4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB1BQ9H0U4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB1BQ9H0U4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB1BQ9H0U4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB1BQ9H0U4 YBX1P4-201ENST00000392794 808 ntBASIC20.58■□□□□ 0.89
RAB1BQ9H0U4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB1BQ9H0U4 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RAB1BQ9H0U4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB1BQ9H0U4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.58■□□□□ 0.88
RAB1BQ9H0U4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB1BQ9H0U4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB1BQ9H0U4 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB1BQ9H0U4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB1BQ9H0U4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB1BQ9H0U4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB1BQ9H0U4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB1BQ9H0U4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB1BQ9H0U4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB1BQ9H0U4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB1BQ9H0U4 KRT8P33-201ENST00000508125 1423 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms