Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.98■■□□□ 1.11
Tubb3Q9ERD7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Tubb3Q9ERD7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.98■■□□□ 1.11
Tubb3Q9ERD7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.98■■□□□ 1.11
Tubb3Q9ERD7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Tubb3Q9ERD7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tubb3Q9ERD7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Tubb3Q9ERD7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tubb3Q9ERD7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Tubb3Q9ERD7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.94■■□□□ 1.1
Tubb3Q9ERD7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Tubb3Q9ERD7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Tubb3Q9ERD7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tubb3Q9ERD7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tubb3Q9ERD7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tubb3Q9ERD7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Tubb3Q9ERD7 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.93■■□□□ 1.1
Tubb3Q9ERD7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Tubb3Q9ERD7 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.92■■□□□ 1.1
Tubb3Q9ERD7 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.92■■□□□ 1.1
Tubb3Q9ERD7 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Tubb3Q9ERD7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tubb3Q9ERD7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tubb3Q9ERD7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.91■■□□□ 1.1
Tubb3Q9ERD7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tubb3Q9ERD7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Tubb3Q9ERD7 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.91■■□□□ 1.1
Tubb3Q9ERD7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tubb3Q9ERD7 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tubb3Q9ERD7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Tubb3Q9ERD7 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.9■■□□□ 1.1
Tubb3Q9ERD7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.89■■□□□ 1.1
Tubb3Q9ERD7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Tubb3Q9ERD7 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tubb3Q9ERD7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tubb3Q9ERD7 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Tubb3Q9ERD7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Tubb3Q9ERD7 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Tubb3Q9ERD7 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tubb3Q9ERD7 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.87■■□□□ 1.09
Tubb3Q9ERD7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Tubb3Q9ERD7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.87■■□□□ 1.09
Tubb3Q9ERD7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Tubb3Q9ERD7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Tubb3Q9ERD7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 Gm9812-201ENSMUST00000061934 968 ntBASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Tubb3Q9ERD7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Tubb3Q9ERD7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Tubb3Q9ERD7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.83■■□□□ 1.08
Tubb3Q9ERD7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tubb3Q9ERD7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Tubb3Q9ERD7 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tubb3Q9ERD7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tubb3Q9ERD7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.82■■□□□ 1.08
Tubb3Q9ERD7 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tubb3Q9ERD7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Tubb3Q9ERD7 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tubb3Q9ERD7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tubb3Q9ERD7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tubb3Q9ERD7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tubb3Q9ERD7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tubb3Q9ERD7 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 335 ms