Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tmem54Q9D7S1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem54Q9D7S1 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tmem54Q9D7S1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tmem54Q9D7S1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem54Q9D7S1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem54Q9D7S1 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem54Q9D7S1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem54Q9D7S1 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem54Q9D7S1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tmem54Q9D7S1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tmem54Q9D7S1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tmem54Q9D7S1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem54Q9D7S1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem54Q9D7S1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tmem54Q9D7S1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tmem54Q9D7S1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tmem54Q9D7S1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.34■□□□□ 0.69
Tmem54Q9D7S1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tmem54Q9D7S1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tmem54Q9D7S1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem54Q9D7S1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Tmem54Q9D7S1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem54Q9D7S1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tmem54Q9D7S1 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.32■□□□□ 0.68
Tmem54Q9D7S1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem54Q9D7S1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem54Q9D7S1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tmem54Q9D7S1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.32■□□□□ 0.68
Tmem54Q9D7S1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.31■□□□□ 0.68
Tmem54Q9D7S1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tmem54Q9D7S1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem54Q9D7S1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem54Q9D7S1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem54Q9D7S1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem54Q9D7S1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.26■□□□□ 0.67
Tmem54Q9D7S1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem54Q9D7S1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.26■□□□□ 0.67
Tmem54Q9D7S1 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem54Q9D7S1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tmem54Q9D7S1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem54Q9D7S1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms