Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Ddx56Q9D0R4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx56Q9D0R4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx56Q9D0R4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ddx56Q9D0R4 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Ddx56Q9D0R4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx56Q9D0R4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ddx56Q9D0R4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.24■■□□□ 1.31
Ddx56Q9D0R4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Ddx56Q9D0R4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx56Q9D0R4 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ddx56Q9D0R4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.22■■□□□ 1.31
Ddx56Q9D0R4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.21■■□□□ 1.31
Ddx56Q9D0R4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx56Q9D0R4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx56Q9D0R4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ddx56Q9D0R4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Ddx56Q9D0R4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Ddx56Q9D0R4 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.2■■□□□ 1.3
Ddx56Q9D0R4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ddx56Q9D0R4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx56Q9D0R4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx56Q9D0R4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx56Q9D0R4 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx56Q9D0R4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ddx56Q9D0R4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.19■■□□□ 1.3
Ddx56Q9D0R4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx56Q9D0R4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.18■■□□□ 1.3
Ddx56Q9D0R4 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx56Q9D0R4 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ddx56Q9D0R4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx56Q9D0R4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx56Q9D0R4 Gm11175-201ENSMUST00000116172 543 ntBASIC23.17■■□□□ 1.3
Ddx56Q9D0R4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Ddx56Q9D0R4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx56Q9D0R4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Ddx56Q9D0R4 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.16■■□□□ 1.3
Ddx56Q9D0R4 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.15■■□□□ 1.3
Ddx56Q9D0R4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx56Q9D0R4 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Ddx56Q9D0R4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx56Q9D0R4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx56Q9D0R4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx56Q9D0R4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx56Q9D0R4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ddx56Q9D0R4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx56Q9D0R4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx56Q9D0R4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx56Q9D0R4 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx56Q9D0R4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx56Q9D0R4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx56Q9D0R4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ddx56Q9D0R4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx56Q9D0R4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx56Q9D0R4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Ddx56Q9D0R4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Ddx56Q9D0R4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx56Q9D0R4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.1■■□□□ 1.29
Ddx56Q9D0R4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx56Q9D0R4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx56Q9D0R4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx56Q9D0R4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx56Q9D0R4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ddx56Q9D0R4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Ddx56Q9D0R4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Ddx56Q9D0R4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx56Q9D0R4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx56Q9D0R4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx56Q9D0R4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Ddx56Q9D0R4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx56Q9D0R4 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx56Q9D0R4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx56Q9D0R4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ddx56Q9D0R4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Ddx56Q9D0R4 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx56Q9D0R4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx56Q9D0R4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.05■■□□□ 1.28
Ddx56Q9D0R4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx56Q9D0R4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx56Q9D0R4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ddx56Q9D0R4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx56Q9D0R4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.04■■□□□ 1.28
Ddx56Q9D0R4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ddx56Q9D0R4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Ddx56Q9D0R4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms