Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shmt2Q9CZN7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.06■□□□□ 0.96
Shmt2Q9CZN7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shmt2Q9CZN7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shmt2Q9CZN7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shmt2Q9CZN7 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shmt2Q9CZN7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shmt2Q9CZN7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Shmt2Q9CZN7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Shmt2Q9CZN7 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shmt2Q9CZN7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Shmt2Q9CZN7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shmt2Q9CZN7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shmt2Q9CZN7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Gm6934-201ENSMUST00000194780 1905 ntBASIC21■□□□□ 0.95
Shmt2Q9CZN7 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shmt2Q9CZN7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21■□□□□ 0.95
Shmt2Q9CZN7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Shmt2Q9CZN7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shmt2Q9CZN7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shmt2Q9CZN7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shmt2Q9CZN7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.98■□□□□ 0.95
Shmt2Q9CZN7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shmt2Q9CZN7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shmt2Q9CZN7 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shmt2Q9CZN7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.97■□□□□ 0.95
Shmt2Q9CZN7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.97■□□□□ 0.95
Shmt2Q9CZN7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shmt2Q9CZN7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shmt2Q9CZN7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shmt2Q9CZN7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.96■□□□□ 0.95
Shmt2Q9CZN7 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shmt2Q9CZN7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shmt2Q9CZN7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Shmt2Q9CZN7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shmt2Q9CZN7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
Shmt2Q9CZN7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Shmt2Q9CZN7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shmt2Q9CZN7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shmt2Q9CZN7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shmt2Q9CZN7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Shmt2Q9CZN7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shmt2Q9CZN7 Scarna2-201ENSMUST00000157560 414 ntBASIC20.93■□□□□ 0.94
Shmt2Q9CZN7 Gm9806-201ENSMUST00000051080 552 ntBASIC20.93■□□□□ 0.94
Shmt2Q9CZN7 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Shmt2Q9CZN7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shmt2Q9CZN7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shmt2Q9CZN7 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shmt2Q9CZN7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shmt2Q9CZN7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shmt2Q9CZN7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shmt2Q9CZN7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.91■□□□□ 0.94
Shmt2Q9CZN7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shmt2Q9CZN7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shmt2Q9CZN7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shmt2Q9CZN7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shmt2Q9CZN7 Gm11687-201ENSMUST00000118911 886 ntBASIC20.9■□□□□ 0.94
Shmt2Q9CZN7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shmt2Q9CZN7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms