Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC8.35□□□□□ -1.07
KRTAP4-3Q9BYR4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
KRTAP4-3Q9BYR4 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 AC142086.6-201ENST00000621154 1765 ntBASIC8.33□□□□□ -1.08
KRTAP4-3Q9BYR4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 BX255925.1-201ENST00000566954 1854 ntBASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 MIR3960-201ENST00000583311 91 ntBASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
KRTAP4-3Q9BYR4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 BHLHE23-202ENST00000612929 1109 ntBASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
KRTAP4-3Q9BYR4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 AC103834.1-201ENST00000520383 144 ntBASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 AL451085.2-201ENST00000605085 799 ntBASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 AP004609.3-201ENST00000610705 1884 ntBASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
KRTAP4-3Q9BYR4 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
KRTAP4-3Q9BYR4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms