Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
CMSS1Q9BQ75 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CMSS1Q9BQ75 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CMSS1Q9BQ75 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CMSS1Q9BQ75 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CMSS1Q9BQ75 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.6■□□□□ 0.89
CMSS1Q9BQ75 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMSS1Q9BQ75 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CMSS1Q9BQ75 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CMSS1Q9BQ75 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CMSS1Q9BQ75 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.59■□□□□ 0.89
CMSS1Q9BQ75 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CMSS1Q9BQ75 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CMSS1Q9BQ75 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CMSS1Q9BQ75 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.58■□□□□ 0.88
CMSS1Q9BQ75 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CMSS1Q9BQ75 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CMSS1Q9BQ75 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CMSS1Q9BQ75 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.57■□□□□ 0.88
CMSS1Q9BQ75 AC010501.1-201ENST00000606270 1962 ntBASIC20.57■□□□□ 0.88
CMSS1Q9BQ75 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CMSS1Q9BQ75 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CMSS1Q9BQ75 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CMSS1Q9BQ75 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.55■□□□□ 0.88
CMSS1Q9BQ75 ERN1-208ENST00000606895 2068 ntBASIC20.55■□□□□ 0.88
CMSS1Q9BQ75 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CMSS1Q9BQ75 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CMSS1Q9BQ75 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CMSS1Q9BQ75 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 AC093323.1-202ENST00000635031 2045 ntBASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CMSS1Q9BQ75 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CMSS1Q9BQ75 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.52■□□□□ 0.88
CMSS1Q9BQ75 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CMSS1Q9BQ75 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.5■□□□□ 0.87
CMSS1Q9BQ75 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.49■□□□□ 0.87
CMSS1Q9BQ75 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CMSS1Q9BQ75 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CMSS1Q9BQ75 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.46■□□□□ 0.87
CMSS1Q9BQ75 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CMSS1Q9BQ75 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CMSS1Q9BQ75 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CMSS1Q9BQ75 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CMSS1Q9BQ75 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CMSS1Q9BQ75 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CMSS1Q9BQ75 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CMSS1Q9BQ75 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms