Protein–RNA interactions for Protein: Q99NC0

Vgll1, Transcription cofactor vestigial-like protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vgll1Q99NC0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vgll1Q99NC0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Vgll1Q99NC0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Terc-201ENSMUST00000082862 423 ntBASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vgll1Q99NC0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vgll1Q99NC0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vgll1Q99NC0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vgll1Q99NC0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vgll1Q99NC0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vgll1Q99NC0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vgll1Q99NC0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.83■□□□□ 0.6
Vgll1Q99NC0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vgll1Q99NC0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vgll1Q99NC0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vgll1Q99NC0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.82■□□□□ 0.6
Vgll1Q99NC0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vgll1Q99NC0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vgll1Q99NC0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.81■□□□□ 0.6
Vgll1Q99NC0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll1Q99NC0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll1Q99NC0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vgll1Q99NC0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.8■□□□□ 0.6
Vgll1Q99NC0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll1Q99NC0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll1Q99NC0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vgll1Q99NC0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.79■□□□□ 0.6
Vgll1Q99NC0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll1Q99NC0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vgll1Q99NC0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.79■□□□□ 0.6
Vgll1Q99NC0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.78■□□□□ 0.6
Vgll1Q99NC0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll1Q99NC0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Vgll1Q99NC0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vgll1Q99NC0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll1Q99NC0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll1Q99NC0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vgll1Q99NC0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Vgll1Q99NC0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Vgll1Q99NC0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vgll1Q99NC0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vgll1Q99NC0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.75■□□□□ 0.59
Vgll1Q99NC0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Vgll1Q99NC0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vgll1Q99NC0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vgll1Q99NC0 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.75■□□□□ 0.59
Vgll1Q99NC0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vgll1Q99NC0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vgll1Q99NC0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vgll1Q99NC0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vgll1Q99NC0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.72■□□□□ 0.59
Vgll1Q99NC0 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vgll1Q99NC0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vgll1Q99NC0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Vgll1Q99NC0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vgll1Q99NC0 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vgll1Q99NC0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vgll1Q99NC0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vgll1Q99NC0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vgll1Q99NC0 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.7■□□□□ 0.58
Vgll1Q99NC0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vgll1Q99NC0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vgll1Q99NC0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vgll1Q99NC0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.68■□□□□ 0.58
Vgll1Q99NC0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vgll1Q99NC0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vgll1Q99NC0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Vgll1Q99NC0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vgll1Q99NC0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vgll1Q99NC0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Vgll1Q99NC0 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.68■□□□□ 0.58
Vgll1Q99NC0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Vgll1Q99NC0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Vgll1Q99NC0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms