Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Thumpd1Q99J36 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd1Q99J36 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd1Q99J36 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Thumpd1Q99J36 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.68■□□□□ 0.74
Thumpd1Q99J36 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd1Q99J36 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Thumpd1Q99J36 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Thumpd1Q99J36 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.66■□□□□ 0.74
Thumpd1Q99J36 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Thumpd1Q99J36 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.65■□□□□ 0.74
Thumpd1Q99J36 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd1Q99J36 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd1Q99J36 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Thumpd1Q99J36 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Thumpd1Q99J36 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Thumpd1Q99J36 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Thumpd1Q99J36 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Thumpd1Q99J36 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd1Q99J36 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Thumpd1Q99J36 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Thumpd1Q99J36 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd1Q99J36 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Thumpd1Q99J36 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.63■□□□□ 0.73
Thumpd1Q99J36 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Thumpd1Q99J36 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Thumpd1Q99J36 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.61■□□□□ 0.73
Thumpd1Q99J36 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Thumpd1Q99J36 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Thumpd1Q99J36 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.58■□□□□ 0.73
Thumpd1Q99J36 Gm22567-201ENSMUST00000175542 342 ntBASIC19.58■□□□□ 0.72
Thumpd1Q99J36 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Thumpd1Q99J36 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.58■□□□□ 0.72
Thumpd1Q99J36 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd1Q99J36 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.57■□□□□ 0.72
Thumpd1Q99J36 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Thumpd1Q99J36 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Thumpd1Q99J36 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.56■□□□□ 0.72
Thumpd1Q99J36 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Thumpd1Q99J36 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Thumpd1Q99J36 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Thumpd1Q99J36 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms