Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RAB40CQ96S21 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB40CQ96S21 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40CQ96S21 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40CQ96S21 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB40CQ96S21 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40CQ96S21 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.63■□□□□ 0.73
RAB40CQ96S21 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RAB40CQ96S21 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40CQ96S21 AC110285.7-201ENST00000624417 1536 ntBASIC19.62■□□□□ 0.73
RAB40CQ96S21 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40CQ96S21 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40CQ96S21 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40CQ96S21 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB40CQ96S21 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB40CQ96S21 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB40CQ96S21 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAB40CQ96S21 AC138932.3-201ENST00000567634 1902 ntBASIC19.61■□□□□ 0.73
RAB40CQ96S21 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB40CQ96S21 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB40CQ96S21 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAB40CQ96S21 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB40CQ96S21 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
RAB40CQ96S21 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB40CQ96S21 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB40CQ96S21 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB40CQ96S21 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB40CQ96S21 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40CQ96S21 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40CQ96S21 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB40CQ96S21 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40CQ96S21 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
RAB40CQ96S21 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB40CQ96S21 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB40CQ96S21 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB40CQ96S21 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB40CQ96S21 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB40CQ96S21 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40CQ96S21 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB40CQ96S21 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.57■□□□□ 0.72
RAB40CQ96S21 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40CQ96S21 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40CQ96S21 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAB40CQ96S21 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40CQ96S21 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40CQ96S21 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40CQ96S21 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40CQ96S21 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40CQ96S21 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.56■□□□□ 0.72
RAB40CQ96S21 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAB40CQ96S21 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40CQ96S21 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40CQ96S21 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40CQ96S21 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40CQ96S21 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40CQ96S21 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.55■□□□□ 0.72
RAB40CQ96S21 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.55■□□□□ 0.72
RAB40CQ96S21 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RAB40CQ96S21 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.55■□□□□ 0.72
RAB40CQ96S21 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RAB40CQ96S21 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RAB40CQ96S21 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
RAB40CQ96S21 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.54■□□□□ 0.72
RAB40CQ96S21 MIR3665-201ENST00000578708 105 ntBASIC19.54■□□□□ 0.72
RAB40CQ96S21 AP006261.1-201ENST00000584783 668 ntBASIC19.54■□□□□ 0.72
RAB40CQ96S21 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40CQ96S21 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40CQ96S21 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.53■□□□□ 0.72
RAB40CQ96S21 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.53■□□□□ 0.72
RAB40CQ96S21 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40CQ96S21 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.53■□□□□ 0.72
RAB40CQ96S21 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RAB40CQ96S21 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RAB40CQ96S21 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40CQ96S21 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.52■□□□□ 0.72
RAB40CQ96S21 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.52■□□□□ 0.72
RAB40CQ96S21 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40CQ96S21 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RAB40CQ96S21 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
RAB40CQ96S21 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RAB40CQ96S21 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RAB40CQ96S21 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB40CQ96S21 DUX4L28-201ENST00000623687 678 ntBASIC19.51■□□□□ 0.71
RAB40CQ96S21 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RAB40CQ96S21 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40CQ96S21 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms