Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
SLC6A18Q96N87 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC6A18Q96N87 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC6A18Q96N87 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC6A18Q96N87 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC6A18Q96N87 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC6A18Q96N87 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC6A18Q96N87 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
SLC6A18Q96N87 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.28■■□□□ 1.48
SLC6A18Q96N87 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SLC6A18Q96N87 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC6A18Q96N87 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC6A18Q96N87 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC6A18Q96N87 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC6A18Q96N87 AC009299.2-201ENST00000482477 511 ntBASIC24.25■■□□□ 1.47
SLC6A18Q96N87 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
SLC6A18Q96N87 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC6A18Q96N87 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.25■■□□□ 1.47
SLC6A18Q96N87 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A18Q96N87 DRD5P2-201ENST00000421395 2012 ntBASIC24.23■■□□□ 1.47
SLC6A18Q96N87 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
SLC6A18Q96N87 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SLC6A18Q96N87 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
SLC6A18Q96N87 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
SLC6A18Q96N87 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.23■■□□□ 1.47
SLC6A18Q96N87 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
SLC6A18Q96N87 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC6A18Q96N87 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC6A18Q96N87 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC6A18Q96N87 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
SLC6A18Q96N87 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 MIR4508-201ENST00000584178 70 ntBASIC24.21■■□□□ 1.47
SLC6A18Q96N87 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC6A18Q96N87 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SLC6A18Q96N87 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
SLC6A18Q96N87 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC6A18Q96N87 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
SLC6A18Q96N87 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SLC6A18Q96N87 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC6A18Q96N87 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC6A18Q96N87 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC6A18Q96N87 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC6A18Q96N87 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A18Q96N87 AL449106.1-201ENST00000608517 1980 ntBASIC24.17■■□□□ 1.46
SLC6A18Q96N87 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A18Q96N87 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A18Q96N87 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.17■■□□□ 1.46
SLC6A18Q96N87 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC24.16■■□□□ 1.46
SLC6A18Q96N87 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC6A18Q96N87 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC24.16■■□□□ 1.46
SLC6A18Q96N87 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC6A18Q96N87 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC6A18Q96N87 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.15■■□□□ 1.46
SLC6A18Q96N87 AC103724.3-201ENST00000564481 992 ntBASIC24.15■■□□□ 1.46
SLC6A18Q96N87 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC6A18Q96N87 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC6A18Q96N87 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.14■■□□□ 1.46
SLC6A18Q96N87 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SLC6A18Q96N87 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SLC6A18Q96N87 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC6A18Q96N87 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SLC6A18Q96N87 AC087393.1-201ENST00000582896 145 ntBASIC24.13■■□□□ 1.45
SLC6A18Q96N87 AL031848.2-201ENST00000607670 837 ntBASIC24.13■■□□□ 1.45
SLC6A18Q96N87 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
SLC6A18Q96N87 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.13■■□□□ 1.45
SLC6A18Q96N87 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A18Q96N87 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A18Q96N87 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A18Q96N87 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A18Q96N87 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A18Q96N87 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC6A18Q96N87 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC6A18Q96N87 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC24.11■■□□□ 1.45
SLC6A18Q96N87 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
SLC6A18Q96N87 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms