Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 AP004609.3-201ENST00000610705 1884 ntBASIC25.21■■□□□ 1.63
PRICKLE1Q96MT3 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
PRICKLE1Q96MT3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE1Q96MT3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE1Q96MT3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE1Q96MT3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
PRICKLE1Q96MT3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PRICKLE1Q96MT3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.19■■□□□ 1.62
PRICKLE1Q96MT3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PRICKLE1Q96MT3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PRICKLE1Q96MT3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.18■■□□□ 1.62
PRICKLE1Q96MT3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PRICKLE1Q96MT3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PRICKLE1Q96MT3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 AC129492.7-201ENST00000622992 756 ntBASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.17■■□□□ 1.62
PRICKLE1Q96MT3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PRICKLE1Q96MT3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PRICKLE1Q96MT3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PRICKLE1Q96MT3 AC004987.1-201ENST00000428627 508 ntBASIC25.15■■□□□ 1.62
PRICKLE1Q96MT3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PRICKLE1Q96MT3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PRICKLE1Q96MT3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PRICKLE1Q96MT3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
PRICKLE1Q96MT3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
PRICKLE1Q96MT3 ATP5G2P3-201ENST00000429083 425 ntBASIC25.13■■□□□ 1.61
PRICKLE1Q96MT3 SPCS2P3-201ENST00000500401 656 ntBASIC25.13■■□□□ 1.61
PRICKLE1Q96MT3 AL033527.3-201ENST00000566366 1196 ntBASIC25.13■■□□□ 1.61
PRICKLE1Q96MT3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PRICKLE1Q96MT3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PRICKLE1Q96MT3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
PRICKLE1Q96MT3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PRICKLE1Q96MT3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
PRICKLE1Q96MT3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 TSPY13P-201ENST00000338964 914 ntBASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 DUX4L9-201ENST00000449051 1259 ntBASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PRICKLE1Q96MT3 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
PRICKLE1Q96MT3 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.09■■□□□ 1.61
PRICKLE1Q96MT3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
PRICKLE1Q96MT3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC25.09■■□□□ 1.61
PRICKLE1Q96MT3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
PRICKLE1Q96MT3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.61
PRICKLE1Q96MT3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC25.07■■□□□ 1.6
PRICKLE1Q96MT3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRICKLE1Q96MT3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.07■■□□□ 1.6
PRICKLE1Q96MT3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
PRICKLE1Q96MT3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PRICKLE1Q96MT3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PRICKLE1Q96MT3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 DUX4L18-201ENST00000553347 1267 ntBASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
PRICKLE1Q96MT3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PRICKLE1Q96MT3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PRICKLE1Q96MT3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC25.04■■□□□ 1.6
PRICKLE1Q96MT3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC25.04■■□□□ 1.6
PRICKLE1Q96MT3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms