Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
R3HDM4Q96D70 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
R3HDM4Q96D70 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 RARRES2P2-201ENST00000394842 485 ntBASIC19.96■□□□□ 0.79
R3HDM4Q96D70 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.96■□□□□ 0.79
R3HDM4Q96D70 AC020928.2-201ENST00000588717 2197 ntBASIC19.95■□□□□ 0.78
R3HDM4Q96D70 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
R3HDM4Q96D70 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
R3HDM4Q96D70 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
R3HDM4Q96D70 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
R3HDM4Q96D70 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 ABHD17AP5-201ENST00000580133 923 ntBASIC19.91■□□□□ 0.78
R3HDM4Q96D70 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
R3HDM4Q96D70 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
R3HDM4Q96D70 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 RNF126P1-201ENST00000567452 1320 ntBASIC19.89■□□□□ 0.77
R3HDM4Q96D70 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
R3HDM4Q96D70 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 AC008813.1-201ENST00000536597 885 ntBASIC19.88■□□□□ 0.77
R3HDM4Q96D70 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
R3HDM4Q96D70 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 AC022413.1-201ENST00000624602 984 ntBASIC19.87■□□□□ 0.77
R3HDM4Q96D70 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
R3HDM4Q96D70 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
R3HDM4Q96D70 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms