Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ZNF428Q96B54 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.51■■■□□ 2.63
ZNF428Q96B54 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.51■■■□□ 2.63
ZNF428Q96B54 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
ZNF428Q96B54 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
ZNF428Q96B54 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
ZNF428Q96B54 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.51■■■□□ 2.63
ZNF428Q96B54 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ZNF428Q96B54 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.5■■■□□ 2.63
ZNF428Q96B54 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.5■■■□□ 2.63
ZNF428Q96B54 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ZNF428Q96B54 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
ZNF428Q96B54 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
ZNF428Q96B54 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZNF428Q96B54 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
ZNF428Q96B54 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ZNF428Q96B54 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
ZNF428Q96B54 AC004987.1-201ENST00000428627 508 ntBASIC31.49■■■□□ 2.63
ZNF428Q96B54 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.48■■■□□ 2.63
ZNF428Q96B54 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
ZNF428Q96B54 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.48■■■□□ 2.63
ZNF428Q96B54 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.47■■■□□ 2.63
ZNF428Q96B54 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
ZNF428Q96B54 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ZNF428Q96B54 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
ZNF428Q96B54 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.47■■■□□ 2.63
ZNF428Q96B54 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.46■■■□□ 2.63
ZNF428Q96B54 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.46■■■□□ 2.63
ZNF428Q96B54 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
ZNF428Q96B54 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.46■■■□□ 2.63
ZNF428Q96B54 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC31.45■■■□□ 2.63
ZNF428Q96B54 AC009831.1-201ENST00000580420 1582 ntBASIC31.44■■■□□ 2.62
ZNF428Q96B54 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ZNF428Q96B54 AC007029.1-201ENST00000604183 313 ntBASIC31.44■■■□□ 2.62
ZNF428Q96B54 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.44■■■□□ 2.62
ZNF428Q96B54 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZNF428Q96B54 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZNF428Q96B54 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZNF428Q96B54 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ZNF428Q96B54 DUX4L18-201ENST00000553347 1267 ntBASIC31.43■■■□□ 2.62
ZNF428Q96B54 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
ZNF428Q96B54 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.43■■■□□ 2.62
ZNF428Q96B54 SMPD5-203ENST00000639008 1464 ntBASIC31.42■■■□□ 2.62
ZNF428Q96B54 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
ZNF428Q96B54 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ZNF428Q96B54 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.42■■■□□ 2.62
ZNF428Q96B54 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.42■■■□□ 2.62
ZNF428Q96B54 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ZNF428Q96B54 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.42■■■□□ 2.62
ZNF428Q96B54 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZNF428Q96B54 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZNF428Q96B54 ATP5G2P3-201ENST00000429083 425 ntBASIC31.41■■■□□ 2.62
ZNF428Q96B54 AL592293.1-201ENST00000502889 1188 ntBASIC31.41■■■□□ 2.62
ZNF428Q96B54 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ZNF428Q96B54 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.41■■■□□ 2.62
ZNF428Q96B54 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
ZNF428Q96B54 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
ZNF428Q96B54 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.4■■■□□ 2.62
ZNF428Q96B54 AC133552.2-201ENST00000619106 1032 ntBASIC31.4■■■□□ 2.62
ZNF428Q96B54 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
ZNF428Q96B54 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
ZNF428Q96B54 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ZNF428Q96B54 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
ZNF428Q96B54 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
ZNF428Q96B54 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC31.39■■■□□ 2.62
ZNF428Q96B54 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
ZNF428Q96B54 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
ZNF428Q96B54 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZNF428Q96B54 MIR3960-201ENST00000583311 91 ntBASIC31.38■■■□□ 2.61
ZNF428Q96B54 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.38■■■□□ 2.61
ZNF428Q96B54 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.37■■■□□ 2.61
ZNF428Q96B54 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZNF428Q96B54 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.37■■■□□ 2.61
ZNF428Q96B54 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ZNF428Q96B54 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ZNF428Q96B54 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.37■■■□□ 2.61
ZNF428Q96B54 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
ZNF428Q96B54 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.37■■■□□ 2.61
ZNF428Q96B54 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ZNF428Q96B54 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZNF428Q96B54 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
ZNF428Q96B54 TSPY13P-201ENST00000338964 914 ntBASIC31.36■■■□□ 2.61
ZNF428Q96B54 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZNF428Q96B54 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.36■■■□□ 2.61
ZNF428Q96B54 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZNF428Q96B54 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC31.35■■■□□ 2.61
ZNF428Q96B54 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZNF428Q96B54 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZNF428Q96B54 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZNF428Q96B54 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.35■■■□□ 2.61
ZNF428Q96B54 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.35■■■□□ 2.61
ZNF428Q96B54 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ZNF428Q96B54 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZNF428Q96B54 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.34■■■□□ 2.61
ZNF428Q96B54 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZNF428Q96B54 AC129492.7-201ENST00000622992 756 ntBASIC31.34■■■□□ 2.61
ZNF428Q96B54 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
ZNF428Q96B54 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.33■■■□□ 2.61
ZNF428Q96B54 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ZNF428Q96B54 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.33■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms