Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb2Q91XX7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb2Q91XX7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhgb2Q91XX7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb2Q91XX7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb2Q91XX7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhgb2Q91XX7 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb2Q91XX7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.71■□□□□ 0.91
Pcdhgb2Q91XX7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Pcdhgb2Q91XX7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.71■□□□□ 0.91
Pcdhgb2Q91XX7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb2Q91XX7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhgb2Q91XX7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb2Q91XX7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhgb2Q91XX7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.7■□□□□ 0.9
Pcdhgb2Q91XX7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb2Q91XX7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.7■□□□□ 0.9
Pcdhgb2Q91XX7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhgb2Q91XX7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb2Q91XX7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb2Q91XX7 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb2Q91XX7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhgb2Q91XX7 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb2Q91XX7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb2Q91XX7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.68■□□□□ 0.9
Pcdhgb2Q91XX7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb2Q91XX7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.68■□□□□ 0.9
Pcdhgb2Q91XX7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhgb2Q91XX7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb2Q91XX7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb2Q91XX7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb2Q91XX7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhgb2Q91XX7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb2Q91XX7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhgb2Q91XX7 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhgb2Q91XX7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdhgb2Q91XX7 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb2Q91XX7 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb2Q91XX7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb2Q91XX7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb2Q91XX7 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhgb2Q91XX7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhgb2Q91XX7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Pcdhgb2Q91XX7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhgb2Q91XX7 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhgb2Q91XX7 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb2Q91XX7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhgb2Q91XX7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhgb2Q91XX7 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdhgb2Q91XX7 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhgb2Q91XX7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb2Q91XX7 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.6■□□□□ 0.89
Pcdhgb2Q91XX7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhgb2Q91XX7 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhgb2Q91XX7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhgb2Q91XX7 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhgb2Q91XX7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdhgb2Q91XX7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.58■□□□□ 0.89
Pcdhgb2Q91XX7 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.58■□□□□ 0.89
Pcdhgb2Q91XX7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhgb2Q91XX7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhgb2Q91XX7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb2Q91XX7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhgb2Q91XX7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.57■□□□□ 0.88
Pcdhgb2Q91XX7 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb2Q91XX7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhgb2Q91XX7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb2Q91XX7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Pcdhgb2Q91XX7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb2Q91XX7 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.56■□□□□ 0.88
Pcdhgb2Q91XX7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhgb2Q91XX7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhgb2Q91XX7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb2Q91XX7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhgb2Q91XX7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhgb2Q91XX7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb2Q91XX7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhgb2Q91XX7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms