Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx1Q91VR5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Ddx1Q91VR5 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.94■■□□□ 1.26
Ddx1Q91VR5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx1Q91VR5 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Ddx1Q91VR5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.94■■□□□ 1.26
Ddx1Q91VR5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx1Q91VR5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx1Q91VR5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx1Q91VR5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ddx1Q91VR5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.92■■□□□ 1.26
Ddx1Q91VR5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Gm15546-201ENSMUST00000122095 826 ntBASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Gm5921-201ENSMUST00000075898 882 ntBASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ddx1Q91VR5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx1Q91VR5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx1Q91VR5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx1Q91VR5 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.9■■□□□ 1.26
Ddx1Q91VR5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.9■■□□□ 1.26
Ddx1Q91VR5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ddx1Q91VR5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Ddx1Q91VR5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.89■■□□□ 1.25
Ddx1Q91VR5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Ddx1Q91VR5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ddx1Q91VR5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Ddx1Q91VR5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.88■■□□□ 1.25
Ddx1Q91VR5 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.88■■□□□ 1.25
Ddx1Q91VR5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx1Q91VR5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx1Q91VR5 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Ddx1Q91VR5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ddx1Q91VR5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx1Q91VR5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Ddx1Q91VR5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Ddx1Q91VR5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Ddx1Q91VR5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx1Q91VR5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.84■■□□□ 1.25
Ddx1Q91VR5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ddx1Q91VR5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ddx1Q91VR5 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ddx1Q91VR5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ddx1Q91VR5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Ddx1Q91VR5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Ddx1Q91VR5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx1Q91VR5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.82■■□□□ 1.24
Ddx1Q91VR5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx1Q91VR5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ddx1Q91VR5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ddx1Q91VR5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.81■■□□□ 1.24
Ddx1Q91VR5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Gm10420-201ENSMUST00000121713 882 ntBASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ddx1Q91VR5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx1Q91VR5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.79■■□□□ 1.24
Ddx1Q91VR5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.79■■□□□ 1.24
Ddx1Q91VR5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC22.79■■□□□ 1.24
Ddx1Q91VR5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx1Q91VR5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ddx1Q91VR5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx1Q91VR5 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ddx1Q91VR5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx1Q91VR5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx1Q91VR5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.77■■□□□ 1.24
Ddx1Q91VR5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx1Q91VR5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ddx1Q91VR5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Ddx1Q91VR5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx1Q91VR5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ddx1Q91VR5 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.75■■□□□ 1.23
Ddx1Q91VR5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.75■■□□□ 1.23
Ddx1Q91VR5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms