Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb11Q91UZ8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhb11Q91UZ8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Pcdhb11Q91UZ8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb11Q91UZ8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Gm14523-201ENSMUST00000117260 558 ntBASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Gm12366-201ENSMUST00000121722 873 ntBASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Gm5786-201ENSMUST00000085368 882 ntBASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Pcdhb11Q91UZ8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdhb11Q91UZ8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdhb11Q91UZ8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb11Q91UZ8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb11Q91UZ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb11Q91UZ8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdhb11Q91UZ8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Pcdhb11Q91UZ8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdhb11Q91UZ8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb11Q91UZ8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb11Q91UZ8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb11Q91UZ8 Gm7332-201ENSMUST00000118351 454 ntBASIC22.58■■□□□ 1.21
Pcdhb11Q91UZ8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdhb11Q91UZ8 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.57■■□□□ 1.2
Pcdhb11Q91UZ8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb11Q91UZ8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb11Q91UZ8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdhb11Q91UZ8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Pcdhb11Q91UZ8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb11Q91UZ8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb11Q91UZ8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb11Q91UZ8 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Pcdhb11Q91UZ8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb11Q91UZ8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
Pcdhb11Q91UZ8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdhb11Q91UZ8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.55■■□□□ 1.2
Pcdhb11Q91UZ8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.55■■□□□ 1.2
Pcdhb11Q91UZ8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Pcdhb11Q91UZ8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb11Q91UZ8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb11Q91UZ8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb11Q91UZ8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb11Q91UZ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdhb11Q91UZ8 Cap2-205ENSMUST00000225824 1634 ntBASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Pcdhb11Q91UZ8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdhb11Q91UZ8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.51■■□□□ 1.19
Pcdhb11Q91UZ8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb11Q91UZ8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb11Q91UZ8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.51■■□□□ 1.19
Pcdhb11Q91UZ8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb11Q91UZ8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Pcdhb11Q91UZ8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.5■■□□□ 1.19
Pcdhb11Q91UZ8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms