Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Sh3kbp1Q8R550 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Gm5921-201ENSMUST00000075898 882 ntBASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sh3kbp1Q8R550 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.68■■□□□ 1.22
Sh3kbp1Q8R550 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.68■■□□□ 1.22
Sh3kbp1Q8R550 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sh3kbp1Q8R550 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Sh3kbp1Q8R550 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.68■■□□□ 1.22
Sh3kbp1Q8R550 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.68■■□□□ 1.22
Sh3kbp1Q8R550 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sh3kbp1Q8R550 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.66■■□□□ 1.22
Sh3kbp1Q8R550 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3kbp1Q8R550 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3kbp1Q8R550 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3kbp1Q8R550 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sh3kbp1Q8R550 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Sh3kbp1Q8R550 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sh3kbp1Q8R550 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.63■■□□□ 1.21
Sh3kbp1Q8R550 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Sh3kbp1Q8R550 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Gm5812-201ENSMUST00000061073 957 ntBASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Sh3kbp1Q8R550 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Sh3kbp1Q8R550 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Sh3kbp1Q8R550 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sh3kbp1Q8R550 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Sh3kbp1Q8R550 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.6■■□□□ 1.21
Sh3kbp1Q8R550 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3kbp1Q8R550 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.59■■□□□ 1.21
Sh3kbp1Q8R550 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Sh3kbp1Q8R550 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3kbp1Q8R550 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.58■■□□□ 1.21
Sh3kbp1Q8R550 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sh3kbp1Q8R550 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.57■■□□□ 1.2
Sh3kbp1Q8R550 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3kbp1Q8R550 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3kbp1Q8R550 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3kbp1Q8R550 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.55■■□□□ 1.2
Sh3kbp1Q8R550 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.55■■□□□ 1.2
Sh3kbp1Q8R550 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3kbp1Q8R550 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3kbp1Q8R550 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3kbp1Q8R550 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Sh3kbp1Q8R550 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3kbp1Q8R550 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3kbp1Q8R550 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3kbp1Q8R550 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Sh3kbp1Q8R550 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Sh3kbp1Q8R550 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
Sh3kbp1Q8R550 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms