Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ccdc58Q8R3Q6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ccdc58Q8R3Q6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.66■□□□□ 0.74
Ccdc58Q8R3Q6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.65■□□□□ 0.74
Ccdc58Q8R3Q6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc58Q8R3Q6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccdc58Q8R3Q6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ccdc58Q8R3Q6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ccdc58Q8R3Q6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Nkain2-201ENSMUST00000092602 558 ntBASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc58Q8R3Q6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.61■□□□□ 0.73
Ccdc58Q8R3Q6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.6■□□□□ 0.73
Ccdc58Q8R3Q6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc58Q8R3Q6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc58Q8R3Q6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc58Q8R3Q6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc58Q8R3Q6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc58Q8R3Q6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccdc58Q8R3Q6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc58Q8R3Q6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc58Q8R3Q6 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.54■□□□□ 0.72
Ccdc58Q8R3Q6 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.54■□□□□ 0.72
Ccdc58Q8R3Q6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc58Q8R3Q6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc58Q8R3Q6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.52■□□□□ 0.72
Ccdc58Q8R3Q6 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ccdc58Q8R3Q6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms