Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 MIR638-201ENST00000385237 100 ntBASIC36.99■■■■□ 3.51
ABCA6Q8N139 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC36.99■■■■□ 3.51
ABCA6Q8N139 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC36.98■■■■□ 3.51
ABCA6Q8N139 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
ABCA6Q8N139 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ABCA6Q8N139 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ABCA6Q8N139 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC36.97■■■■□ 3.51
ABCA6Q8N139 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC36.97■■■■□ 3.51
ABCA6Q8N139 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC36.97■■■■□ 3.51
ABCA6Q8N139 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC36.97■■■■□ 3.51
ABCA6Q8N139 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ABCA6Q8N139 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ABCA6Q8N139 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ABCA6Q8N139 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC36.96■■■■□ 3.51
ABCA6Q8N139 RPS2P7-201ENST00000447334 885 ntBASIC36.96■■■■□ 3.51
ABCA6Q8N139 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC36.96■■■■□ 3.51
ABCA6Q8N139 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
ABCA6Q8N139 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC36.95■■■■□ 3.51
ABCA6Q8N139 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
ABCA6Q8N139 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC36.94■■■■□ 3.5
ABCA6Q8N139 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
ABCA6Q8N139 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC36.94■■■■□ 3.5
ABCA6Q8N139 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC36.94■■■■□ 3.5
ABCA6Q8N139 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
ABCA6Q8N139 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC36.93■■■■□ 3.5
ABCA6Q8N139 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC36.93■■■■□ 3.5
ABCA6Q8N139 KRT16P3-201ENST00000439127 1283 ntBASIC36.92■■■■□ 3.5
ABCA6Q8N139 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC36.92■■■■□ 3.5
ABCA6Q8N139 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC36.92■■■■□ 3.5
ABCA6Q8N139 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC36.92■■■■□ 3.5
ABCA6Q8N139 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC36.92■■■■□ 3.5
ABCA6Q8N139 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC36.92■■■■□ 3.5
ABCA6Q8N139 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC36.91■■■■□ 3.5
ABCA6Q8N139 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC36.91■■■■□ 3.5
ABCA6Q8N139 LONRF2P2-201ENST00000439212 571 ntBASIC36.9■■■■□ 3.5
ABCA6Q8N139 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC36.9■■■■□ 3.5
ABCA6Q8N139 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC36.9■■■■□ 3.5
ABCA6Q8N139 PEMT-206ENST00000435340 960 ntTSL 5 BASIC36.89■■■■□ 3.5
ABCA6Q8N139 MIR4787-201ENST00000607364 84 ntBASIC36.88■■■■□ 3.5
ABCA6Q8N139 WHAMMP3-201ENST00000611636 1609 ntBASIC36.88■■■■□ 3.49
ABCA6Q8N139 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
ABCA6Q8N139 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC36.88■■■■□ 3.49
ABCA6Q8N139 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC36.87■■■■□ 3.49
ABCA6Q8N139 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC36.87■■■■□ 3.49
ABCA6Q8N139 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC36.86■■■■□ 3.49
ABCA6Q8N139 BX664725.1-201ENST00000438252 379 ntBASIC36.86■■■■□ 3.49
ABCA6Q8N139 AC131281.2-201ENST00000520478 145 ntBASIC36.86■■■■□ 3.49
ABCA6Q8N139 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.86■■■■□ 3.49
ABCA6Q8N139 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC36.86■■■■□ 3.49
ABCA6Q8N139 AL139393.2-201ENST00000608721 2025 ntBASIC36.85■■■■□ 3.49
ABCA6Q8N139 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC36.85■■■■□ 3.49
ABCA6Q8N139 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
ABCA6Q8N139 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC36.84■■■■□ 3.49
ABCA6Q8N139 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
ABCA6Q8N139 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC36.84■■■■□ 3.49
ABCA6Q8N139 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC36.84■■■■□ 3.49
ABCA6Q8N139 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
ABCA6Q8N139 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC36.84■■■■□ 3.49
ABCA6Q8N139 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC36.84■■■■□ 3.49
ABCA6Q8N139 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC36.83■■■■□ 3.49
ABCA6Q8N139 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC36.83■■■■□ 3.49
ABCA6Q8N139 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC36.82■■■■□ 3.49
ABCA6Q8N139 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
ABCA6Q8N139 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC36.81■■■■□ 3.48
ABCA6Q8N139 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
ABCA6Q8N139 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
ABCA6Q8N139 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC36.81■■■■□ 3.48
ABCA6Q8N139 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC36.81■■■■□ 3.48
ABCA6Q8N139 KRT125P-201ENST00000546827 989 ntBASIC36.81■■■■□ 3.48
ABCA6Q8N139 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC36.8■■■■□ 3.48
ABCA6Q8N139 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC36.8■■■■□ 3.48
ABCA6Q8N139 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
ABCA6Q8N139 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC36.79■■■■□ 3.48
ABCA6Q8N139 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC36.79■■■■□ 3.48
ABCA6Q8N139 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC36.79■■■■□ 3.48
ABCA6Q8N139 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC36.79■■■■□ 3.48
ABCA6Q8N139 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
ABCA6Q8N139 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC36.79■■■■□ 3.48
ABCA6Q8N139 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC36.78■■■■□ 3.48
ABCA6Q8N139 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
ABCA6Q8N139 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC36.78■■■■□ 3.48
ABCA6Q8N139 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC36.77■■■■□ 3.48
ABCA6Q8N139 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
ABCA6Q8N139 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
ABCA6Q8N139 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
ABCA6Q8N139 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC36.76■■■■□ 3.48
ABCA6Q8N139 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC36.76■■■■□ 3.48
ABCA6Q8N139 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
ABCA6Q8N139 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
ABCA6Q8N139 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
ABCA6Q8N139 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC36.76■■■■□ 3.47
ABCA6Q8N139 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC36.76■■■■□ 3.47
ABCA6Q8N139 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC36.76■■■■□ 3.47
ABCA6Q8N139 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC36.75■■■■□ 3.47
ABCA6Q8N139 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC36.75■■■■□ 3.47
ABCA6Q8N139 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
ABCA6Q8N139 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC36.75■■■■□ 3.47
ABCA6Q8N139 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
ABCA6Q8N139 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC36.74■■■■□ 3.47
ABCA6Q8N139 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms