Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Abca8bQ8K440 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
Abca8bQ8K440 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC34.03■■■■□ 3.04
Abca8bQ8K440 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC34.01■■■■□ 3.04
Abca8bQ8K440 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC34■■■■□ 3.03
Abca8bQ8K440 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Abca8bQ8K440 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC33.99■■■■□ 3.03
Abca8bQ8K440 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC33.99■■■■□ 3.03
Abca8bQ8K440 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC33.99■■■■□ 3.03
Abca8bQ8K440 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC33.98■■■■□ 3.03
Abca8bQ8K440 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Abca8bQ8K440 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC33.98■■■■□ 3.03
Abca8bQ8K440 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Abca8bQ8K440 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC33.97■■■■□ 3.03
Abca8bQ8K440 Gm13241-201ENSMUST00000094493 780 ntBASIC33.97■■■■□ 3.03
Abca8bQ8K440 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC33.96■■■■□ 3.03
Abca8bQ8K440 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC33.96■■■■□ 3.03
Abca8bQ8K440 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Abca8bQ8K440 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Abca8bQ8K440 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Abca8bQ8K440 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
Abca8bQ8K440 Gm16464-201ENSMUST00000117815 1095 ntBASIC33.94■■■■□ 3.02
Abca8bQ8K440 Gm6206-201ENSMUST00000133472 2199 ntBASIC33.94■■■■□ 3.02
Abca8bQ8K440 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Abca8bQ8K440 Gm7199-201ENSMUST00000118327 1485 ntBASIC33.92■■■■□ 3.02
Abca8bQ8K440 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC33.92■■■■□ 3.02
Abca8bQ8K440 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC33.91■■■■□ 3.02
Abca8bQ8K440 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
Abca8bQ8K440 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC33.9■■■■□ 3.02
Abca8bQ8K440 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
Abca8bQ8K440 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC33.89■■■■□ 3.02
Abca8bQ8K440 Serp2-204ENSMUST00000228055 705 ntBASIC33.89■■■■□ 3.02
Abca8bQ8K440 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Abca8bQ8K440 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC33.88■■■■□ 3.01
Abca8bQ8K440 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC33.88■■■■□ 3.01
Abca8bQ8K440 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC33.88■■■■□ 3.01
Abca8bQ8K440 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC33.87■■■■□ 3.01
Abca8bQ8K440 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
Abca8bQ8K440 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC33.86■■■■□ 3.01
Abca8bQ8K440 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Abca8bQ8K440 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Abca8bQ8K440 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC33.85■■■■□ 3.01
Abca8bQ8K440 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Abca8bQ8K440 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Abca8bQ8K440 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
Abca8bQ8K440 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC33.82■■■■□ 3.01
Abca8bQ8K440 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC33.82■■■■□ 3.01
Abca8bQ8K440 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3
Abca8bQ8K440 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC33.82■■■■□ 3
Abca8bQ8K440 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC33.81■■■■□ 3
Abca8bQ8K440 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC33.81■■■■□ 3
Abca8bQ8K440 Gm22238-201ENSMUST00000175222 88 ntBASIC33.81■■■■□ 3
Abca8bQ8K440 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC33.8■■■■□ 3
Abca8bQ8K440 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC33.79■■■■□ 3
Abca8bQ8K440 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC33.79■■■■□ 3
Abca8bQ8K440 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC33.79■■■■□ 3
Abca8bQ8K440 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC33.79■■■■□ 3
Abca8bQ8K440 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC33.79■■■■□ 3
Abca8bQ8K440 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC33.79■■■■□ 3
Abca8bQ8K440 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC33.79■■■■□ 3
Abca8bQ8K440 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC33.79■■■■□ 3
Abca8bQ8K440 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC33.77■■■■□ 3
Abca8bQ8K440 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
Abca8bQ8K440 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■■□ 3
Abca8bQ8K440 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC33.76■■■■□ 3
Abca8bQ8K440 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Abca8bQ8K440 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Abca8bQ8K440 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Abca8bQ8K440 Gm43034-201ENSMUST00000198678 1364 ntBASIC33.76■■■□□ 2.99
Abca8bQ8K440 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Abca8bQ8K440 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Abca8bQ8K440 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC33.75■■■□□ 2.99
Abca8bQ8K440 Gm7417-201ENSMUST00000192950 473 ntBASIC33.75■■■□□ 2.99
Abca8bQ8K440 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC33.75■■■□□ 2.99
Abca8bQ8K440 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC33.75■■■□□ 2.99
Abca8bQ8K440 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC33.74■■■□□ 2.99
Abca8bQ8K440 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
Abca8bQ8K440 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC33.74■■■□□ 2.99
Abca8bQ8K440 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC33.74■■■□□ 2.99
Abca8bQ8K440 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC33.74■■■□□ 2.99
Abca8bQ8K440 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC33.74■■■□□ 2.99
Abca8bQ8K440 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Abca8bQ8K440 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
Abca8bQ8K440 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Abca8bQ8K440 AC164433.2-201ENSMUST00000226346 1701 ntBASIC33.72■■■□□ 2.99
Abca8bQ8K440 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC33.72■■■□□ 2.99
Abca8bQ8K440 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC33.72■■■□□ 2.99
Abca8bQ8K440 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC33.71■■■□□ 2.99
Abca8bQ8K440 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC33.71■■■□□ 2.99
Abca8bQ8K440 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC33.71■■■□□ 2.99
Abca8bQ8K440 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC33.71■■■□□ 2.99
Abca8bQ8K440 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Abca8bQ8K440 Gm9847-201ENSMUST00000052528 599 ntBASIC33.7■■■□□ 2.99
Abca8bQ8K440 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC33.7■■■□□ 2.99
Abca8bQ8K440 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC33.69■■■□□ 2.98
Abca8bQ8K440 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
Abca8bQ8K440 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC33.68■■■□□ 2.98
Abca8bQ8K440 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC33.66■■■□□ 2.98
Abca8bQ8K440 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC33.65■■■□□ 2.98
Abca8bQ8K440 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC33.65■■■□□ 2.98
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms