Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn4rl1Q8K0S5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn4rl1Q8K0S5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rtn4rl1Q8K0S5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Rtn4rl1Q8K0S5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rtn4rl1Q8K0S5 Gm10232-201ENSMUST00000089221 720 ntBASIC22.85■■□□□ 1.25
Rtn4rl1Q8K0S5 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Rtn4rl1Q8K0S5 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn4rl1Q8K0S5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn4rl1Q8K0S5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rtn4rl1Q8K0S5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.83■■□□□ 1.25
Rtn4rl1Q8K0S5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rtn4rl1Q8K0S5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
Rtn4rl1Q8K0S5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rtn4rl1Q8K0S5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn4rl1Q8K0S5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn4rl1Q8K0S5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rtn4rl1Q8K0S5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Etf1-202ENSMUST00000180351 108 ntBASIC22.81■■□□□ 1.24
Rtn4rl1Q8K0S5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtn4rl1Q8K0S5 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtn4rl1Q8K0S5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rtn4rl1Q8K0S5 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Rtn4rl1Q8K0S5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rtn4rl1Q8K0S5 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rtn4rl1Q8K0S5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Rtn4rl1Q8K0S5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Rtn4rl1Q8K0S5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
Rtn4rl1Q8K0S5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn4rl1Q8K0S5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Rtn4rl1Q8K0S5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Rtn4rl1Q8K0S5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Rtn4rl1Q8K0S5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rtn4rl1Q8K0S5 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Rtn4rl1Q8K0S5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rtn4rl1Q8K0S5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.66■■□□□ 1.22
Rtn4rl1Q8K0S5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms