Protein–RNA interactions for Protein: Q8CGU1

Calcoco1, Calcium-binding and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calcoco1Q8CGU1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Calcoco1Q8CGU1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Calcoco1Q8CGU1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Calcoco1Q8CGU1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Calcoco1Q8CGU1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Calcoco1Q8CGU1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Calcoco1Q8CGU1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.83■■□□□ 1.25
Calcoco1Q8CGU1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Calcoco1Q8CGU1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.83■■□□□ 1.25
Calcoco1Q8CGU1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Calcoco1Q8CGU1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.83■■□□□ 1.25
Calcoco1Q8CGU1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
Calcoco1Q8CGU1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Calcoco1Q8CGU1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Calcoco1Q8CGU1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.24
Calcoco1Q8CGU1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Calcoco1Q8CGU1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Calcoco1Q8CGU1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Calcoco1Q8CGU1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Calcoco1Q8CGU1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Calcoco1Q8CGU1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Calcoco1Q8CGU1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Calcoco1Q8CGU1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.81■■□□□ 1.24
Calcoco1Q8CGU1 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Calcoco1Q8CGU1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Calcoco1Q8CGU1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Calcoco1Q8CGU1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
Calcoco1Q8CGU1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Calcoco1Q8CGU1 Gm6934-201ENSMUST00000194780 1905 ntBASIC22.78■■□□□ 1.24
Calcoco1Q8CGU1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Calcoco1Q8CGU1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Calcoco1Q8CGU1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Calcoco1Q8CGU1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC22.77■■□□□ 1.24
Calcoco1Q8CGU1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Calcoco1Q8CGU1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Calcoco1Q8CGU1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Calcoco1Q8CGU1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Calcoco1Q8CGU1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC22.74■■□□□ 1.23
Calcoco1Q8CGU1 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.74■■□□□ 1.23
Calcoco1Q8CGU1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Calcoco1Q8CGU1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Calcoco1Q8CGU1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Calcoco1Q8CGU1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Calcoco1Q8CGU1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Calcoco1Q8CGU1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Calcoco1Q8CGU1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Calcoco1Q8CGU1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Calcoco1Q8CGU1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Calcoco1Q8CGU1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.23
Calcoco1Q8CGU1 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.7■■□□□ 1.22
Calcoco1Q8CGU1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.7■■□□□ 1.22
Calcoco1Q8CGU1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Calcoco1Q8CGU1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Calcoco1Q8CGU1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Calcoco1Q8CGU1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Calcoco1Q8CGU1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.69■■□□□ 1.22
Calcoco1Q8CGU1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Calcoco1Q8CGU1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Calcoco1Q8CGU1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Calcoco1Q8CGU1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Calcoco1Q8CGU1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Calcoco1Q8CGU1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Calcoco1Q8CGU1 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.66■■□□□ 1.22
Calcoco1Q8CGU1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Calcoco1Q8CGU1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Calcoco1Q8CGU1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms