Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC36.05■■■■□ 3.36
Pabpn1Q8CCS6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC36.05■■■■□ 3.36
Pabpn1Q8CCS6 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC36.05■■■■□ 3.36
Pabpn1Q8CCS6 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC36.05■■■■□ 3.36
Pabpn1Q8CCS6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Pabpn1Q8CCS6 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC36.05■■■■□ 3.36
Pabpn1Q8CCS6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC36.04■■■■□ 3.36
Pabpn1Q8CCS6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC36.04■■■■□ 3.36
Pabpn1Q8CCS6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC36.04■■■■□ 3.36
Pabpn1Q8CCS6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC36.04■■■■□ 3.36
Pabpn1Q8CCS6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pabpn1Q8CCS6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC36.03■■■■□ 3.36
Pabpn1Q8CCS6 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pabpn1Q8CCS6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC36.03■■■■□ 3.36
Pabpn1Q8CCS6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC36.03■■■■□ 3.36
Pabpn1Q8CCS6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC36.03■■■■□ 3.36
Pabpn1Q8CCS6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Pabpn1Q8CCS6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC36.01■■■■□ 3.36
Pabpn1Q8CCS6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC36.01■■■■□ 3.36
Pabpn1Q8CCS6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.35
Pabpn1Q8CCS6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC36■■■■□ 3.35
Pabpn1Q8CCS6 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC35.99■■■■□ 3.35
Pabpn1Q8CCS6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Pabpn1Q8CCS6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Pabpn1Q8CCS6 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Pabpn1Q8CCS6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC35.98■■■■□ 3.35
Pabpn1Q8CCS6 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC35.98■■■■□ 3.35
Pabpn1Q8CCS6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC35.98■■■■□ 3.35
Pabpn1Q8CCS6 AC116713.1-201ENSMUST00000215074 430 ntBASIC35.98■■■■□ 3.35
Pabpn1Q8CCS6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC35.98■■■■□ 3.35
Pabpn1Q8CCS6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC35.97■■■■□ 3.35
Pabpn1Q8CCS6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC35.97■■■■□ 3.35
Pabpn1Q8CCS6 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC35.96■■■■□ 3.35
Pabpn1Q8CCS6 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC35.96■■■■□ 3.35
Pabpn1Q8CCS6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC35.96■■■■□ 3.35
Pabpn1Q8CCS6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.95■■■■□ 3.35
Pabpn1Q8CCS6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC35.95■■■■□ 3.35
Pabpn1Q8CCS6 Gm40881-201ENSMUST00000223397 166 ntBASIC35.95■■■■□ 3.35
Pabpn1Q8CCS6 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC35.95■■■■□ 3.35
Pabpn1Q8CCS6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC35.94■■■■□ 3.34
Pabpn1Q8CCS6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC35.94■■■■□ 3.34
Pabpn1Q8CCS6 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC35.94■■■■□ 3.34
Pabpn1Q8CCS6 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC35.94■■■■□ 3.34
Pabpn1Q8CCS6 Gm28731-201ENSMUST00000185564 1569 ntBASIC35.93■■■■□ 3.34
Pabpn1Q8CCS6 Gm43445-201ENSMUST00000198564 2091 ntBASIC35.93■■■■□ 3.34
Pabpn1Q8CCS6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Pabpn1Q8CCS6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Pabpn1Q8CCS6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC35.93■■■■□ 3.34
Pabpn1Q8CCS6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Pabpn1Q8CCS6 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC35.92■■■■□ 3.34
Pabpn1Q8CCS6 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC35.92■■■■□ 3.34
Pabpn1Q8CCS6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
Pabpn1Q8CCS6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
Pabpn1Q8CCS6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC35.89■■■■□ 3.34
Pabpn1Q8CCS6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC35.89■■■■□ 3.34
Pabpn1Q8CCS6 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC35.88■■■■□ 3.33
Pabpn1Q8CCS6 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC35.88■■■■□ 3.33
Pabpn1Q8CCS6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC35.88■■■■□ 3.33
Pabpn1Q8CCS6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC35.88■■■■□ 3.33
Pabpn1Q8CCS6 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC35.87■■■■□ 3.33
Pabpn1Q8CCS6 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
Pabpn1Q8CCS6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC35.87■■■■□ 3.33
Pabpn1Q8CCS6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC35.87■■■■□ 3.33
Pabpn1Q8CCS6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
Pabpn1Q8CCS6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
Pabpn1Q8CCS6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
Pabpn1Q8CCS6 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Pabpn1Q8CCS6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC35.85■■■■□ 3.33
Pabpn1Q8CCS6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Pabpn1Q8CCS6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
Pabpn1Q8CCS6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC35.85■■■■□ 3.33
Pabpn1Q8CCS6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC35.85■■■■□ 3.33
Pabpn1Q8CCS6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Pabpn1Q8CCS6 AC112142.1-201ENSMUST00000228796 918 ntBASIC35.84■■■■□ 3.33
Pabpn1Q8CCS6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC35.83■■■■□ 3.33
Pabpn1Q8CCS6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC35.83■■■■□ 3.33
Pabpn1Q8CCS6 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC35.83■■■■□ 3.33
Pabpn1Q8CCS6 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
Pabpn1Q8CCS6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Pabpn1Q8CCS6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC35.82■■■■□ 3.32
Pabpn1Q8CCS6 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC35.82■■■■□ 3.32
Pabpn1Q8CCS6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Pabpn1Q8CCS6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
Pabpn1Q8CCS6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC35.81■■■■□ 3.32
Pabpn1Q8CCS6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Pabpn1Q8CCS6 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC35.8■■■■□ 3.32
Pabpn1Q8CCS6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC35.8■■■■□ 3.32
Pabpn1Q8CCS6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
Pabpn1Q8CCS6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
Pabpn1Q8CCS6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
Pabpn1Q8CCS6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC35.79■■■■□ 3.32
Pabpn1Q8CCS6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
Pabpn1Q8CCS6 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Pabpn1Q8CCS6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
Pabpn1Q8CCS6 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC35.77■■■■□ 3.32
Pabpn1Q8CCS6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC35.76■■■■□ 3.32
Pabpn1Q8CCS6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC35.76■■■■□ 3.32
Pabpn1Q8CCS6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.32
Pabpn1Q8CCS6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC35.76■■■■□ 3.32
Pabpn1Q8CCS6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC35.75■■■■□ 3.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms