Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SynpoQ8CC35 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SynpoQ8CC35 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SynpoQ8CC35 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SynpoQ8CC35 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SynpoQ8CC35 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.19■□□□□ 0.98
SynpoQ8CC35 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynpoQ8CC35 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynpoQ8CC35 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynpoQ8CC35 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SynpoQ8CC35 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SynpoQ8CC35 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynpoQ8CC35 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SynpoQ8CC35 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.18■□□□□ 0.98
SynpoQ8CC35 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynpoQ8CC35 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynpoQ8CC35 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynpoQ8CC35 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SynpoQ8CC35 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SynpoQ8CC35 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SynpoQ8CC35 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.17■□□□□ 0.98
SynpoQ8CC35 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.17■□□□□ 0.98
SynpoQ8CC35 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SynpoQ8CC35 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.17■□□□□ 0.98
SynpoQ8CC35 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SynpoQ8CC35 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SynpoQ8CC35 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SynpoQ8CC35 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SynpoQ8CC35 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.14■□□□□ 0.97
SynpoQ8CC35 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SynpoQ8CC35 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SynpoQ8CC35 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SynpoQ8CC35 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SynpoQ8CC35 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.13■□□□□ 0.97
SynpoQ8CC35 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SynpoQ8CC35 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SynpoQ8CC35 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SynpoQ8CC35 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SynpoQ8CC35 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.11■□□□□ 0.97
SynpoQ8CC35 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SynpoQ8CC35 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SynpoQ8CC35 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SynpoQ8CC35 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.1■□□□□ 0.97
SynpoQ8CC35 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SynpoQ8CC35 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Gm10420-201ENSMUST00000121713 882 ntBASIC21.09■□□□□ 0.97
SynpoQ8CC35 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SynpoQ8CC35 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SynpoQ8CC35 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SynpoQ8CC35 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SynpoQ8CC35 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SynpoQ8CC35 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SynpoQ8CC35 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SynpoQ8CC35 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SynpoQ8CC35 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SynpoQ8CC35 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SynpoQ8CC35 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SynpoQ8CC35 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SynpoQ8CC35 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SynpoQ8CC35 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SynpoQ8CC35 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SynpoQ8CC35 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SynpoQ8CC35 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.05■□□□□ 0.96
SynpoQ8CC35 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SynpoQ8CC35 Gm44428-201ENSMUST00000204474 874 ntBASIC21.05■□□□□ 0.96
SynpoQ8CC35 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.05■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms