Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Sh3rf2Q8BZT2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf2Q8BZT2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf2Q8BZT2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf2Q8BZT2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf2Q8BZT2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf2Q8BZT2 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Sh3rf2Q8BZT2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sh3rf2Q8BZT2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Sh3rf2Q8BZT2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.57■■□□□ 1.2
Sh3rf2Q8BZT2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sh3rf2Q8BZT2 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.57■■□□□ 1.2
Sh3rf2Q8BZT2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC22.57■■□□□ 1.2
Sh3rf2Q8BZT2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3rf2Q8BZT2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Sh3rf2Q8BZT2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3rf2Q8BZT2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC22.56■■□□□ 1.2
Sh3rf2Q8BZT2 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Sh3rf2Q8BZT2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Sh3rf2Q8BZT2 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3rf2Q8BZT2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3rf2Q8BZT2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3rf2Q8BZT2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC22.55■■□□□ 1.2
Sh3rf2Q8BZT2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.55■■□□□ 1.2
Sh3rf2Q8BZT2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Sh3rf2Q8BZT2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Sh3rf2Q8BZT2 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
Sh3rf2Q8BZT2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Sh3rf2Q8BZT2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Sh3rf2Q8BZT2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sh3rf2Q8BZT2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf2Q8BZT2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf2Q8BZT2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sh3rf2Q8BZT2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf2Q8BZT2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf2Q8BZT2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf2Q8BZT2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Sh3rf2Q8BZT2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.51■■□□□ 1.19
Sh3rf2Q8BZT2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
Sh3rf2Q8BZT2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Sh3rf2Q8BZT2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf2Q8BZT2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC22.49■■□□□ 1.19
Sh3rf2Q8BZT2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Sh3rf2Q8BZT2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Sh3rf2Q8BZT2 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.48■■□□□ 1.19
Sh3rf2Q8BZT2 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.48■■□□□ 1.19
Sh3rf2Q8BZT2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf2Q8BZT2 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Sh3rf2Q8BZT2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.47■■□□□ 1.19
Sh3rf2Q8BZT2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf2Q8BZT2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.46■■□□□ 1.19
Sh3rf2Q8BZT2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Sh3rf2Q8BZT2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Sh3rf2Q8BZT2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.46■■□□□ 1.19
Sh3rf2Q8BZT2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Sh3rf2Q8BZT2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Sh3rf2Q8BZT2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Sh3rf2Q8BZT2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.45■■□□□ 1.18
Sh3rf2Q8BZT2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Sh3rf2Q8BZT2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Sh3rf2Q8BZT2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf2Q8BZT2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf2Q8BZT2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf2Q8BZT2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Sh3rf2Q8BZT2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.42■■□□□ 1.18
Sh3rf2Q8BZT2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
Sh3rf2Q8BZT2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf2Q8BZT2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf2Q8BZT2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Sh3rf2Q8BZT2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Sh3rf2Q8BZT2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 AC093043.1-201ENSMUST00000226700 898 ntBASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms