Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.35■□□□□ 0.69
Lrtm1Q8BXQ3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrtm1Q8BXQ3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrtm1Q8BXQ3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrtm1Q8BXQ3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrtm1Q8BXQ3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrtm1Q8BXQ3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrtm1Q8BXQ3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lrtm1Q8BXQ3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrtm1Q8BXQ3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrtm1Q8BXQ3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrtm1Q8BXQ3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrtm1Q8BXQ3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrtm1Q8BXQ3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrtm1Q8BXQ3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrtm1Q8BXQ3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lrtm1Q8BXQ3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrtm1Q8BXQ3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lrtm1Q8BXQ3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lrtm1Q8BXQ3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrtm1Q8BXQ3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Lrtm1Q8BXQ3 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.28■□□□□ 0.68
Lrtm1Q8BXQ3 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.28■□□□□ 0.68
Lrtm1Q8BXQ3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lrtm1Q8BXQ3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lrtm1Q8BXQ3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lrtm1Q8BXQ3 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Lrtm1Q8BXQ3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Lrtm1Q8BXQ3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lrtm1Q8BXQ3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lrtm1Q8BXQ3 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrtm1Q8BXQ3 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.25■□□□□ 0.67
Lrtm1Q8BXQ3 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lrtm1Q8BXQ3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.25■□□□□ 0.67
Lrtm1Q8BXQ3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lrtm1Q8BXQ3 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrtm1Q8BXQ3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrtm1Q8BXQ3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lrtm1Q8BXQ3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lrtm1Q8BXQ3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.23■□□□□ 0.67
Lrtm1Q8BXQ3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrtm1Q8BXQ3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lrtm1Q8BXQ3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lrtm1Q8BXQ3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Lrtm1Q8BXQ3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrtm1Q8BXQ3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Lrtm1Q8BXQ3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Lrtm1Q8BXQ3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lrtm1Q8BXQ3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lrtm1Q8BXQ3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrtm1Q8BXQ3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.21■□□□□ 0.67
Lrtm1Q8BXQ3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lrtm1Q8BXQ3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrtm1Q8BXQ3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lrtm1Q8BXQ3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lrtm1Q8BXQ3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrtm1Q8BXQ3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrtm1Q8BXQ3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms