Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VmacQ8BP01 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.65■■□□□ 1.7
VmacQ8BP01 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VmacQ8BP01 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
VmacQ8BP01 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
VmacQ8BP01 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
VmacQ8BP01 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
VmacQ8BP01 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
VmacQ8BP01 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC25.64■■□□□ 1.7
VmacQ8BP01 Gm14523-201ENSMUST00000117260 558 ntBASIC25.64■■□□□ 1.7
VmacQ8BP01 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.64■■□□□ 1.7
VmacQ8BP01 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
VmacQ8BP01 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
VmacQ8BP01 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
VmacQ8BP01 Gm27502-201ENSMUST00000183495 199 ntBASIC25.63■■□□□ 1.69
VmacQ8BP01 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
VmacQ8BP01 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
VmacQ8BP01 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
VmacQ8BP01 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
VmacQ8BP01 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
VmacQ8BP01 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VmacQ8BP01 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VmacQ8BP01 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
VmacQ8BP01 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
VmacQ8BP01 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.61■■□□□ 1.69
VmacQ8BP01 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VmacQ8BP01 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
VmacQ8BP01 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
VmacQ8BP01 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
VmacQ8BP01 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
VmacQ8BP01 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.6■■□□□ 1.69
VmacQ8BP01 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
VmacQ8BP01 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
VmacQ8BP01 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
VmacQ8BP01 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VmacQ8BP01 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
VmacQ8BP01 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC25.59■■□□□ 1.69
VmacQ8BP01 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
VmacQ8BP01 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
VmacQ8BP01 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
VmacQ8BP01 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
VmacQ8BP01 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
VmacQ8BP01 Gm22567-201ENSMUST00000175542 342 ntBASIC25.57■■□□□ 1.68
VmacQ8BP01 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VmacQ8BP01 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VmacQ8BP01 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
VmacQ8BP01 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.56■■□□□ 1.68
VmacQ8BP01 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25.56■■□□□ 1.68
VmacQ8BP01 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.56■■□□□ 1.68
VmacQ8BP01 Gm7332-201ENSMUST00000118351 454 ntBASIC25.56■■□□□ 1.68
VmacQ8BP01 Gm12366-201ENSMUST00000121722 873 ntBASIC25.56■■□□□ 1.68
VmacQ8BP01 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.56■■□□□ 1.68
VmacQ8BP01 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.56■■□□□ 1.68
VmacQ8BP01 Gm5786-201ENSMUST00000085368 882 ntBASIC25.56■■□□□ 1.68
VmacQ8BP01 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
VmacQ8BP01 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
VmacQ8BP01 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VmacQ8BP01 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VmacQ8BP01 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VmacQ8BP01 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VmacQ8BP01 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
VmacQ8BP01 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.55■■□□□ 1.68
VmacQ8BP01 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VmacQ8BP01 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
VmacQ8BP01 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
VmacQ8BP01 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
VmacQ8BP01 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
VmacQ8BP01 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VmacQ8BP01 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
VmacQ8BP01 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.53■■□□□ 1.68
VmacQ8BP01 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VmacQ8BP01 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
VmacQ8BP01 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
VmacQ8BP01 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25.52■■□□□ 1.68
VmacQ8BP01 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
VmacQ8BP01 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
VmacQ8BP01 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.51■■□□□ 1.67
VmacQ8BP01 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
VmacQ8BP01 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
VmacQ8BP01 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VmacQ8BP01 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VmacQ8BP01 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
VmacQ8BP01 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
VmacQ8BP01 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC25.49■■□□□ 1.67
VmacQ8BP01 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
VmacQ8BP01 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VmacQ8BP01 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
VmacQ8BP01 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
VmacQ8BP01 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VmacQ8BP01 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.48■■□□□ 1.67
VmacQ8BP01 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
VmacQ8BP01 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
VmacQ8BP01 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
VmacQ8BP01 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VmacQ8BP01 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
VmacQ8BP01 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
VmacQ8BP01 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.47■■□□□ 1.67
VmacQ8BP01 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
VmacQ8BP01 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
VmacQ8BP01 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.47■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms