Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pcdh20Q8BIZ0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh20Q8BIZ0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Pcdh20Q8BIZ0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh20Q8BIZ0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh20Q8BIZ0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Pcdh20Q8BIZ0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh20Q8BIZ0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.43■■□□□ 1.02
Pcdh20Q8BIZ0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh20Q8BIZ0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh20Q8BIZ0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh20Q8BIZ0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pcdh20Q8BIZ0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh20Q8BIZ0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh20Q8BIZ0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh20Q8BIZ0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pcdh20Q8BIZ0 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pcdh20Q8BIZ0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Scarna2-201ENSMUST00000157560 414 ntBASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Gm9806-201ENSMUST00000051080 552 ntBASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Gm9812-201ENSMUST00000061934 968 ntBASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pcdh20Q8BIZ0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pcdh20Q8BIZ0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdh20Q8BIZ0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh20Q8BIZ0 Gm11687-201ENSMUST00000118911 886 ntBASIC21.39■■□□□ 1.01
Pcdh20Q8BIZ0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.39■■□□□ 1.01
Pcdh20Q8BIZ0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdh20Q8BIZ0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.38■■□□□ 1.01
Pcdh20Q8BIZ0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh20Q8BIZ0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh20Q8BIZ0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Pcdh20Q8BIZ0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh20Q8BIZ0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdh20Q8BIZ0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh20Q8BIZ0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh20Q8BIZ0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdh20Q8BIZ0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh20Q8BIZ0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh20Q8BIZ0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdh20Q8BIZ0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.34■■□□□ 1.01
Pcdh20Q8BIZ0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh20Q8BIZ0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.33■■□□□ 1.01
Pcdh20Q8BIZ0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh20Q8BIZ0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.33■■□□□ 1.01
Pcdh20Q8BIZ0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdh20Q8BIZ0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 Gm16437-201ENSMUST00000025669 507 ntBASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.32■■□□□ 1
Pcdh20Q8BIZ0 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.31■■□□□ 1
Pcdh20Q8BIZ0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.3■■□□□ 1
Pcdh20Q8BIZ0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh20Q8BIZ0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh20Q8BIZ0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdh20Q8BIZ0 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.29■■□□□ 1
Pcdh20Q8BIZ0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdh20Q8BIZ0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh20Q8BIZ0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdh20Q8BIZ0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Pcdh20Q8BIZ0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh20Q8BIZ0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh20Q8BIZ0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdh20Q8BIZ0 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.26■□□□□ 0.99
Pcdh20Q8BIZ0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms