Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smndc1Q8BGT7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Smndc1Q8BGT7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Smndc1Q8BGT7 Gm7432-201ENSMUST00000210343 879 ntBASIC21.22■□□□□ 0.99
Smndc1Q8BGT7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smndc1Q8BGT7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smndc1Q8BGT7 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smndc1Q8BGT7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Smndc1Q8BGT7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Smndc1Q8BGT7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Smndc1Q8BGT7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smndc1Q8BGT7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.18■□□□□ 0.98
Smndc1Q8BGT7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.18■□□□□ 0.98
Smndc1Q8BGT7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Smndc1Q8BGT7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.18■□□□□ 0.98
Smndc1Q8BGT7 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smndc1Q8BGT7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.18■□□□□ 0.98
Smndc1Q8BGT7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smndc1Q8BGT7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.16■□□□□ 0.98
Smndc1Q8BGT7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smndc1Q8BGT7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smndc1Q8BGT7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smndc1Q8BGT7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smndc1Q8BGT7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smndc1Q8BGT7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smndc1Q8BGT7 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Smndc1Q8BGT7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smndc1Q8BGT7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.13■□□□□ 0.97
Smndc1Q8BGT7 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smndc1Q8BGT7 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smndc1Q8BGT7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smndc1Q8BGT7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smndc1Q8BGT7 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.12■□□□□ 0.97
Smndc1Q8BGT7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smndc1Q8BGT7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.11■□□□□ 0.97
Smndc1Q8BGT7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smndc1Q8BGT7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smndc1Q8BGT7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smndc1Q8BGT7 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.1■□□□□ 0.97
Smndc1Q8BGT7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Gm11599-201ENSMUST00000118720 878 ntBASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smndc1Q8BGT7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms