Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Samm50Q8BGH2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.82■■□□□ 1.72
Samm50Q8BGH2 Gm16437-201ENSMUST00000025669 507 ntBASIC25.82■■□□□ 1.72
Samm50Q8BGH2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
Samm50Q8BGH2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
Samm50Q8BGH2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Samm50Q8BGH2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Samm50Q8BGH2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Samm50Q8BGH2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Samm50Q8BGH2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Samm50Q8BGH2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Samm50Q8BGH2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
Samm50Q8BGH2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Gm9812-201ENSMUST00000061934 968 ntBASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.8■■□□□ 1.72
Samm50Q8BGH2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Samm50Q8BGH2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC25.78■■□□□ 1.72
Samm50Q8BGH2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Samm50Q8BGH2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.77■■□□□ 1.72
Samm50Q8BGH2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.76■■□□□ 1.71
Samm50Q8BGH2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Samm50Q8BGH2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Samm50Q8BGH2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Samm50Q8BGH2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Samm50Q8BGH2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Samm50Q8BGH2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Samm50Q8BGH2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Samm50Q8BGH2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.73■■□□□ 1.71
Samm50Q8BGH2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Samm50Q8BGH2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.72■■□□□ 1.71
Samm50Q8BGH2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Samm50Q8BGH2 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
Samm50Q8BGH2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
Samm50Q8BGH2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Samm50Q8BGH2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Samm50Q8BGH2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Samm50Q8BGH2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
Samm50Q8BGH2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Samm50Q8BGH2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.68■■□□□ 1.7
Samm50Q8BGH2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Samm50Q8BGH2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
Samm50Q8BGH2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Samm50Q8BGH2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.67■■□□□ 1.7
Samm50Q8BGH2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Samm50Q8BGH2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Samm50Q8BGH2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
Samm50Q8BGH2 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.66■■□□□ 1.7
Samm50Q8BGH2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC25.66■■□□□ 1.7
Samm50Q8BGH2 AC153911.1-201ENSMUST00000220378 758 ntBASIC25.66■■□□□ 1.7
Samm50Q8BGH2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Samm50Q8BGH2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
Samm50Q8BGH2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
Samm50Q8BGH2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Samm50Q8BGH2 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Samm50Q8BGH2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
Samm50Q8BGH2 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Samm50Q8BGH2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Samm50Q8BGH2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Samm50Q8BGH2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Samm50Q8BGH2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Samm50Q8BGH2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Samm50Q8BGH2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Samm50Q8BGH2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
Samm50Q8BGH2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Samm50Q8BGH2 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Samm50Q8BGH2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Samm50Q8BGH2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC25.62■■□□□ 1.69
Samm50Q8BGH2 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Samm50Q8BGH2 Terc-201ENSMUST00000082862 423 ntBASIC25.61■■□□□ 1.69
Samm50Q8BGH2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Samm50Q8BGH2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Samm50Q8BGH2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Samm50Q8BGH2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Samm50Q8BGH2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.59■■□□□ 1.69
Samm50Q8BGH2 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
Samm50Q8BGH2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Samm50Q8BGH2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC25.58■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms